Nothobranchius furzeri (turquoise killifish): 107394875
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Entry
107394875 CDS
T05163
Name
(RefSeq) POU domain, class 2, transcription factor 2-like
KO
K09364
POU domain transcription factor, class 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107394875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107394875
03021 Transcription machinery [BR:
nfu03021
]
107394875
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107394875
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
107394875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
107394875
NCBI-ProteinID:
XP_015829523
UniProt:
A0A9D2XZC5
LinkDB
All DBs
Position
sgr19:22176923..22189530
Genome browser
AA seq
511 aa
AA seq
DB search
MPGHPLQSPAQFLLSQPAQAQPPQQSLLSTANLIQLPQQSAGGLLTSPPRMGLQAQREKS
SDAGSGSSSGVVGAASGSGGAVTSVGATSASGSTMSSSLTSSLTPSGQGGHMTEEPSDLE
ELEQFARTFKQRRIKLGFTQGDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLL
EKWLSDAETMAVDSMLPSPSSISSPMLGIEGLPGRRRKKRTSIETNVRVVLERNFSANQK
PTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRINPSSSSTPPLSSQTSPVVTHKAHCYS
PHMISSQTLSQVTTSLSTTGASSSPSASCPMTPVSSAAMLSSAATPPPLPPQSTASPVPS
GLNSGNTMMGVSTGMNQALIGSNPLATMQALAASSGQLAISSLEGGPGHMLVGGHGGPAV
PTSLRPSLFLNRPGLLPMVTGASSASVGMGLVSGGGCGPRASFCQSPPTGTSNLMSPTSC
PEESASPCSSPASFCSFSEASPPPLGGAMAE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccaccccctccagtctccggcccagttcctcctgtctcagcctgcacaggcc
cagccgccgcagcagagtttgctgtcaacagctaatctgatccagctacctcagcaaagt
gcaggaggcctcctcaccagcccgcctcgcatgggactgcaagcacagagagagaagagc
agcgatgctggaagcggcagcagcagtggcgtcgtgggagctgccagcgggagcggcggt
gctgtaacatctgtaggagcaacatctgcatccggcagcaccatgagctcctccctaacc
tccagtctgacgcctagcggccaggggggtcacatgaccgaggagcccagcgatctggag
gagctggagcagttcgctcggaccttcaagcagcgacgcataaagctgggattcacccag
ggggacgtcggcgttgccatggggaagctgtacgggaacgacttcagccagaccaccatc
tcccgcttcgaggcgctcaacctgagctttaagaacatgtgcaagctgaagccactgctg
gagaagtggctgagtgacgcagaaacgatggcggtggacagcatgctgcctagcccctcc
tccatctcctcccccatgctgggcatcgagggtctcccggggcgacgcaggaagaaacga
accagcatcgagaccaacgtccgcgtggttctggagcggaacttcagcgcgaaccagaag
ccgacgtcggaggagatccttctgatggcggagcagctgaacatggagaaggaggtgatt
cgggtttggttctgtaaccgccgacagaaggagaaacggatcaacccgtccagcagcagc
acccctcccttgtccagccagacttcacccgtggtcacgcacaaagcccactgctacagc
ccccacatgatatcgagtcagactctgtcccaggtcacgaccagcctcagcacaacaggt
gccagttcgtcaccttcagcttcctgccccatgactccagtcagctcggcggccatgttg
tcttcagcagcaactcctcctcctcttcctcctcagagcacagccagcccagttccttcc
ggcctcaactctgggaacacgatgatgggagtcagcacggggatgaaccaggccctcatc
ggcagtaaccctctggctaccatgcaagcgctggcagcctccagcggtcagctggccatc
tccagcctggaaggcggacctggtcacatgcttgtaggtggacacgggggtcccgctgtc
cccacctcccttcgtccctctctcttcctgaaccgccccggtctcctccccatggtgacc
ggcgcttcatccgcctccgttggcatgggactggtcagcgggggtgggtgtggccccagg
gcctccttttgccaatctccacccaccggcaccagcaacctcatgagcccgacctcctgc
cctgaggagtctgcgtccccttgctcaagccccgcctccttctgttccttcagcgaagcc
tcgccgccccccctgggaggagccatggccgagtga
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integrated database retrieval system
