Nothobranchius furzeri (turquoise killifish): 107394912
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Entry
107394912 CDS
T05163
Name
(RefSeq) tropomyosin beta chain isoform X1
KO
K10374
tropomyosin 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04260
Cardiac muscle contraction
nfu04261
Adrenergic signaling in cardiomyocytes
nfu04814
Motor proteins
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107394912
04820 Cytoskeleton in muscle cells
107394912
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107394912
04261 Adrenergic signaling in cardiomyocytes
107394912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107394912
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
107394912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
PUMA_CC
ATG16
Laminin_I
XhlA
TMF_DNA_bd
ERM_helical
Crescentin
CENP-F_leu_zip
SlyX
Nuf2_DHR10-like
Exonuc_VII_L
DUF1664
DUF745
GAS
FPP
MscS_porin
DUF7169
DUF16
DUF5917
Fib_alpha
DUF6317
AAA_13
Fez1
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
107394912
NCBI-ProteinID:
XP_015829589
UniProt:
A0A9D2Y9G3
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Position
sgr02:complement(34661077..34682127)
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AA seq
284 aa
AA seq
DB search
MEAIKKKMQMLKLDKENAIDRAEQAEVDKKGAEDKCKQLEEELLGLQKKLKGVEDELDKY
SESLKDAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGDLERSE
ERAEVAEAKSADLEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTEKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaaaaagatgcagatgctgaagttggataaggaaaatgcgatagac
cgtgcagagcaggctgaggtggacaagaagggagcggaggacaaatgcaaacagctggag
gaggagctcctcggtctgcagaagaagctcaaaggagtggaagatgaactggacaaatac
tccgagtcccttaaggatgcccaagagaagctggagcaggcagagaaaaaggcaacagat
gctgaagcagaggtggcctctctgaacaggcgtatccagctggttgaggaggagttggac
cgggcgcaggagaggctagctacagctctgcagaagctggaggaagctgagaaagctgca
gatgaaagcgagagagggatgaaggtcatagagaacagagcaacaaaagatgaggagaag
atggagatccaggagatgcagttaaaggaggccaagcacatcgctgaggaggctgaccgc
aaatatgaagaggttgctcgtaagctggtgattctggagggagacctggagcgctcagag
gaacgtgctgaggtggctgaggctaaatcagctgaccttgaggaagaattgaaaaatgtc
accaacaacttgaagtctctggaagcccaggctgagaagtactcacaaaaggaggacaaa
tatgaagaagaaataaaagttcttacagaaaaactgaaggaggctgagaccagagctgag
tttgcagaacgatctgtcgccaagctggagaaaaccatcgacgacctggaagacgaggtg
tatgctcagaagctaaagggcaaagctctcagcgaggagctggacctggctctcaacgac
atgaccacactgtag
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