Nothobranchius furzeri (turquoise killifish): 107394944
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Entry
107394944 CDS
T05163
Symbol
kdm1b
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107394944 (kdm1b)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107394944 (kdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
SWIRM
zf-CW
DAO
Pyr_redox_2
HI0933_like
Thi4
Pyr_redox_3
FAD_binding_2
Pyr_redox
FAD_oxidored
FAD_binding_3
Lycopene_cycl
GIDA
AlaDh_PNT_C
2-Hacid_dh_C
TrkA_N
MurD-like_N
zf-RING_2
KARI_N
Attractin
HcgC
Motif
Other DBs
NCBI-GeneID:
107394944
NCBI-ProteinID:
XP_015829648
UniProt:
A0A9D2Y157
LinkDB
All DBs
Position
sgr19:23094966..23104008
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AA seq
931 aa
AA seq
DB search
MDGEQRSPKVIKPKRPFPLRNRKWCCCYSDALIFSSFTTTKKETNLFEPFIKKLQTRNKV
HKLRHCRAMLSDADYSGNASGTRRAKKRSSEESPGESQTPRISGRQTNARVKRTNNPPPG
QSKRKATDTEEEDDQSEKKYRKCEKAGCSATYPVCFASASERCAKNGYTSRWYHLSCGEH
FCNECFDHYYRSHKDGYETFASWKRVWTSNGKSEPSLKAFMADQLLPYWVQCSRPDCRKW
RQLTKEIQLTTALAATYRCGMKLSNIKMEGPDQCSQPEDLRVAEVTDSWWHSMLILPPLL
KESPAGPFLAAYYPDCVGMSPSGSLSTASVTELRADHCRAVQSQSKSVSAGDQTRCVGPG
PGMSGRNRYRYLSVPGLCPYFQPFYQPNECGKALCVRPDMMELDELYEFPEFSRDPTMYL
ALRNLILASWHKNCTEVLTAEKCAEHIIVRGLVRVRCVQELDRVLHFMTRKGLINTGVLA
VKRPLLPESFCSKNVIVIGAGAAGLAAARQLQNFGTQVLVLEARERIGGRVWDDVSLGVT
VGRGAQIVNGCVNNPIALMCEQMGIRMHKLGERCDLFQEDGKVTDPAIDKRMDFHFNAIL
DVVSDWRKDKSQGQDSPLGEKVREIKKNFLQESGIQFSELEEKVLQFHLSNLEFACGSSL
DQVSARSWDHNEFFAQFSGDHTLLTEGYSPLLRRLAEGLDIRTNCPVQAVDYSGDLVKVS
SSGGSQWSAHRVLVSVPLTLLQKNVLRFTPPLPERKLKAIHSLGAGIIEKVALQFPYRFW
DTKVQSADYFGHIPPAPEKRGMFSIFYDLDPQGKRAVLMSIVSGEAVPAVRDLEDKQVVD
ECMKVLRELFTEQEVPEPSSYFVTHWNKDPWSQMSYSFVKTGGSGEAYDVLAEDVQGKVF
FAGEATNRHFPQTVTGAYLSGVREASKMVSL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggacggggagcagcggagtccaaaagtcatcaagcccaaacgcccatttcctctgaga
aacaggaagtggtgttgttgctacagcgacgcattgattttctcctccttcacaacaaca
aaaaaggagacgaatttgtttgaaccgtttataaaaaagcttcagacccgaaataaagtt
cacaagttacgccactgccgcgcgatgctgtcggacgcagattactccgggaatgcctct
gggactcggagagccaagaagaggagctccgaggagtctccgggggagagccagacccca
cgcatctccgggaggcagaccaacgcccgggtgaagcgcaccaacaacccgccacctgga
cagagtaaaagaaaagccacggacaccgaggaagaagatgaccagtctgagaagaagtac
aggaagtgtgagaaggccggctgctcggccacgtaccccgtttgtttcgccagtgcatcg
gaaaggtgtgcaaagaatggctacacgtctcgctggtatcacctgtcgtgtggagaacat
ttctgcaacgagtgtttcgatcattactacagaagtcacaaagacggctatgagacgttc
gcttcgtggaagagagtgtggaccagtaacgggaaaagtgagcccagcctgaaggccttc
atggcagaccagctgctgccctactgggttcagtgctccagaccggactgcaggaagtgg
cgtcagctgaccaaagagatccagctcaccacggctctggcagcaacgtaccgctgtggc
atgaagttgagcaacatcaaaatggaagggcccgaccagtgctcccaaccagaagacctg
agagtggccgaggtgacggacagctggtggcactccatgctgattttaccgccgctgctg
aaggagagtccggccggcccgttcctcgctgcctactaccccgactgtgtggggatgagc
ccttcggggtccctcagcactgcttctgtgaccgagctgagggccgatcactgcagagcc
gtccagtctcagagtaagtctgtgagcgcaggagaccagacacgctgtgttggacctggt
ccagggatgtctggtcgtaaccggtaccgttacctttcagttccaggcctgtgtccgtac
ttccagcccttctaccagcccaatgaatgcggaaaagcactgtgtgtccggccggatatg
atggaactggatgagctttacgagtttccagagttttccagagatcccaccatgtacctg
gctctacggaacctcatcctggcctcctggcataagaactgcacggaggttctgacagca
gagaaatgtgccgagcacatcatcgtgcgtggcctggtgcgtgtgcgctgcgtgcaggag
ttggaccgggttctgcacttcatgacccggaagggtctgatcaacaccggggttctggcc
gtgaaacgtccgctgctgcctgaaagcttctgctcaaagaacgtgatcgtcatcggcgcc
ggcgccgccggactggctgctgcgcgacagctgcagaactttggcactcaggttctggtc
ttagaggcccgggagaggatcggcggccgggtttgggacgatgtttctctgggcgtgacc
gtgggtcgtggtgctcagatcgttaacggctgtgtgaacaaccccatcgccctgatgtgt
gaacagatggggatccggatgcacaagctgggcgaacgctgcgacctgttccaggaggac
gggaaggtcaccgaccccgccatcgacaagcgcatggacttccacttcaacgccatcctg
gacgtggtgtcggactggaggaaggacaagtcgcagggccaggactcgcctctaggggaa
aaggtccgggaaataaagaagaacttcctgcaggaatctgggatccagttcagtgagctg
gaggaaaaagttcttcagtttcatctcagtaacctggagtttgcctgcgggagctcgttg
gaccaggtttcggcccgatcctgggaccacaacgagttctttgcccagttctcaggagat
cacaccctcctcaccgagggctactcgcctctcctccgcaggctggccgagggcctcgac
atccgcaccaactgcccggtccaggccgtcgactactcgggtgaccttgttaaagtgagc
tcctccggcgggtcccagtggtcggctcacagggtcctcgtcagcgtcccgctgacgctg
ctgcagaagaacgtcctccgcttcacgccgccgctccctgagaggaagctgaaggcgatc
cacagcctgggagcgggaatcatagaaaaggtcgctcttcagttcccgtaccgattctgg
gacacgaaggtccaaagtgcagattactttggtcacatccctcccgctccggagaagaga
ggcatgttcagcattttctacgacctcgaccctcagggaaaacgggcggttctgatgtcc
atcgtctccggtgaggctgttcctgctgtccgagacctggaggacaaacaggtggtggac
gagtgcatgaaggtcctgcgggaacttttcacagagcaggaggtccccgagccctccagt
tactttgtcactcactggaacaaagacccgtggtcccagatgtcctacagctttgtgaag
acgggcgggagcggggaggcctacgacgtcctggctgaagacgtgcagggaaaagtcttc
ttcgctggagaggccacaaaccgacacttcccccagacggtgaccggagcctacctcagc
ggcgtccgcgaggccagtaagatggtttctctgtag
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