KEGG   Nothobranchius furzeri (turquoise killifish): 107395192
Entry
107395192         CDS       T05163                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nfu03400]
    107395192 (helq)
Enzymes [BR:nfu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     107395192 (helq)
DNA repair and recombination proteins [BR:nfu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    107395192 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DNA_pol_lambd_f DUF4332
Other DBs
NCBI-GeneID: 107395192
NCBI-ProteinID: XP_015829998
UniProt: A0A1A7ZIG3
LinkDB
Position
sgr02:35978644..36011264
AA seq 1007 aa
MSSGRLEVKIKRVCSRKRSREFLKTRLAPAQQRGRCSPIRTSSMTERRPVEFCSDSEDLF
GDYDSILEGGSLLAKLDDAGKNERQRAANHLDSLTDSIMDEFREEPFEGLPASQLQFQQH
FTEEAKRSRQVNENQTSTPRQSVTRMAEARIETNRGGDGRRSCGVRRSMADLLKKTMLEN
AAAAPVKVSRTAELKEAVVSEEISVALQAMETISPETTDLGPFFGLPSKVKELMHKLRGI
QNLYEWQETCLSLDCVQQRKNLIYSLPTSGGKTLVAEILILKELLCRKKDCLLVLPYISL
VQEKVRGLASFGLELDFMVEEYAGSKGKFPPVKRRNNRSLYVATIEKAHSLVNSLIETSR
LENLGLVVVDELHMLGDGSRGAVIEMTLSKVQYMSKTTQIIGMSATLGNIKDLQTFLKAE
NYTNDFRPVQLREYVKLSDSIYEVDPKEENCFTFSRVLNFKYSSAMQKVDPDHVIALVTE
VIPTHSCLVFCPTKKNCENVAGMICRYLREEFLKHRENEKAILLQELRDSGNGSVCPVLR
RTVPYGVAYHHSGLTSEERKLVEEAYSSGVLCLLTCTSTLAAGVNLPARRVILRSPYVAT
DFLKRSQYKQMVGRAGRAGIDSVGESILILQEKDKLMAKELVCAPMENCYSNLMHDEGKG
MLSLILSLIGLNISTSLQQIQEFLSGTLLFVQQKQLCVEKSLQDVTLQCVDMLKEKDLIT
IKVTGCNSPELQITRLGRAAYKGSVDLTYCDTLYKDLSKGLEGLLLNSYLHLVYLVTPYD
LIPQCNPDWMVYFRQFTLLSAAEQKMSAAIGVPESFVARKAAGQTVKKTVNLGVVRRMYL
ALVLFSLLKETSVWSVAERFQLSRGFLQTLLNSASAFCSCVLHFTEELEEFWPFKALLTE
LTRRLTYCVKAELIPLMEVSGVMESRAKQLYNAGYKTLTHLANADPAVLCRTIENLFKKQ
ANLMVASAKVSVIRGPSSVCSCWEQMVSAEHRKSQQASQVLLGRNTV
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgagttcggggaggctcgaggtcaaaataaaacgagtttgctcaagaaaacgatctcga
gagtttctgaagactcgcttggcacctgctcaacagaggggacgatgttcccccatcaga
accagcagcatgactgagcgtcggcctgtggagttctgcagtgacagtgaagacctattc
ggtgactatgacagcatccttgaaggcggctctcttctggcaaaactggacgacgcggga
aaaaatgaaaggcaacgagccgcaaaccacctggactctctcactgactccatcatggat
gagttcagagaggaaccctttgagggtttaccagccagccagctgcagtttcaacagcat
ttcacagaagaggcaaagaggagccgacaggtgaatgaaaaccaaacctctacacctcgt
cagagtgtcaccaggatggctgaggccagaatagaaactaacagaggaggtgatggcaga
aggagctgtggagtaaggaggagcatggcagacctgctaaagaagaccatgcttgagaac
gcagctgcagctcccgtcaaggtctctagaacagctgagctaaaagaggctgtggtttct
gaggagatcagtgttgccttgcaggccatggaaaccatttctcctgagacaacagacctc
gggcctttctttggactccctagcaaagtgaaggagctgatgcataaactgagaggaatc
caaaacctatacgagtggcaggagacgtgcctgagcctggactgtgttcagcagaggaag
aacctgatctactctctccccaccagtggagggaagaccctggtggctgagatcctcatc
ctcaaggagctgctctgtaggaagaaggactgtctgcttgtgttaccgtacatatcgctg
gtgcaggagaaggttcgcgggttagcgagcttcggcctggagctggacttcatggtggag
gagtacgctggcagcaaggggaagttccctccggtgaagagaaggaacaaccgatctctg
tacgttgccacgatagaaaaggcccacagcctcgtcaactccctgatcgagaccagcaga
ctggagaacctggggctggtggtggtcgatgagctccacatgctgggtgacggcagcaga
ggggcggtgatagaaatgactttatctaaagtgcagtacatgagcaaaacaactcagatt
attgggatgagtgccactctgggaaacatcaaggacctgcagacgttcctgaaggcagaa
aactacaccaacgacttcaggcctgtgcagctgagagaatacgttaagctgagtgattcg
atctatgaagtcgacccaaaggaggagaactgcttcacattctcacgtgtgctcaacttt
aaatattccagcgccatgcagaaggtggacccggatcacgtcattgctctggtgactgaa
gtcatcccaacacattcatgtctggtcttctgtcccaccaagaagaactgtgagaatgta
gcagggatgatctgcagatatctgagagaggagttcctgaagcatcgtgagaacgagaag
gccattctcctgcaggagctgagggacagtgggaatgggtctgtgtgtccggtgttgaga
agaacggtgccttatggtgtggcctatcaccacagcgggctgacctcagaggagaggaaa
ctggtggaggaagcctactctagtggtgtgctctgcctcctcacctgtacctccaccctg
gctgcaggggtcaacctgccagctcgcagggtgatcctgcgctcgccatacgtggccaca
gacttcctgaagaggagccagtacaagcagatggtgggcagggctggccgcgctgggatc
gactccgtgggagagagcatcctcatcctgcaggagaaagacaagcttatggccaaagaa
ctggtttgtgccccgatggagaactgttacagcaacctgatgcatgatgaaggaaaaggc
atgctgagcctcatcctgtccctgattggattaaatatcagcacgtcgctgcagcagatc
caggagttcctgagtggaacgctgctgttcgtgcagcagaagcagctgtgtgtggagaag
agtttgcaggacgtcacgctacagtgtgtggacatgctgaaagaaaaagacctcattacc
atcaaggttacgggctgcaatagtccagagctgcagatcacacggctggggagagccgct
tacaaaggctcggtggatttgacctactgtgacactctgtacaaagacttgagtaaaggt
cttgaggggctgctgctcaacagctacctgcacctggtctacctggtgactccctacgac
ctgatcccgcagtgcaaccccgactggatggtttacttcagacagttcaccctgttgtcc
gccgctgagcaaaagatgtctgcagccatcggcgttccagagagttttgtggcgagaaaa
gccgcaggacagactgtgaagaagaccgtaaacctcggggtggtgaggcggatgtacctc
gctcttgtactcttcagtttgctgaaggaaaccagcgtttggagcgtggctgagagattc
cagttgagtcgaggtttcctccaaaccttgctcaactccgcctccgcgttctgctcgtgt
gtgctgcacttcactgaggagctggaggagttctggccattcaaagctctgctgacggag
ctaacccgacgactgacttactgcgtaaaggccgagctgattcctctgatggaggtgtcg
ggggtcatggagtcaagagcaaagcagctgtacaacgctggctacaagacgctgactcac
ctggctaacgctgaccctgctgtcctctgcaggaccatagaaaacctcttcaagaagcag
gccaacttgatggtggcctcggccaaagtgagtgtcatcagaggtcctagttctgtttgc
agctgctgggagcagatggtttcagctgaacacagaaaatcccaacaggcctcacaggtt
ttactcggtaggaacacagtttga

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