Nothobranchius furzeri (turquoise killifish): 107395253
Help
Entry
107395253 CDS
T05163
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107395253 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107395253 (nup54)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107395253 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
107395253
NCBI-ProteinID:
XP_015830067
UniProt:
A0A8C6MED9
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MAFSFGGATSNTEASAPGFSFGAFGAKTTASTTFGFNPTATTTTASSGFGTLTAPGFGTV
TSTSAPATGFSFGSTNTGFGGLGAGSTMAGGFSFGGFGLNANPAAISFNAGCFGTATTTG
TIFNFGNSLTSTGTFGGFGATTTTAAAPGSTFSFTTPSNTTGGLFGNTANKGFGFPAGLG
TGTATGTSGFGTGLGATGFGGFNIQPTQQQGGLFGPQTQQQGQTQPSQLYQQVTALSAPT
LLGDERDSILAKWNQLQAYWGTGKGYYSNNNPPVEFTQENSFCRFKAVGYSCIPVSKDED
GLVVLVLNKKEADVRAQQQQLVESLHKVLGSNQTLSVNVDGVKALPNDQTEVIIYLVERS
PNGTSKRIPSSTFLAFLEQASVKVQLTQIGVTMSVTRTELSPAQLKQLLQNAPAGVDPII
WEQAKVDNPDPERLIPVPMVGFKELLCRLQIQEQMTKQHQTRVDIISNDISELQKNQATS
VAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQFK
GRLNELMSQIRMQNHFGAVRSEERYSVDAGLLREIKQHLKQQQDGLSHLISVIKEDLEDI
KLIEHGLSDRGHTRGGILS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttagttttggcggcgccacgagcaatacagaagcaagcgcgcccgggttctca
ttcggcgcatttggtgccaagacgacggcatcaaccacgtttggattcaaccccacggcc
accacgaccaccgcttcttcagggtttggcactctaacagctcctggttttgggactgtc
acctccacttctgcacccgctacaggatttagctttggctccaccaacacgggatttggg
gggcttggagctggaagcaccatggctggcgggtttagttttggggggtttggtttaaat
gccaacccagcagcaatcagctttaatgcagggtgctttggtacagcaaccactactggc
actattttcaattttggtaatagcctgactagcacaggtacatttggtggctttggggca
acgacaacaacagctgctgcaccggggtccactttcagctttactaccccctccaataca
acaggaggcctgtttgggaacacagccaacaaagggtttggattcccagcaggactggga
accggtaccgctactggaacatcagggtttggaactggattaggagcaactggatttgga
ggttttaacatccagccgacgcagcagcaaggaggcctgtttggcccgcagacccaacag
cagggtcagactcagcccagccagctttaccagcaggtcaccgctctgtcggccccgacc
ctcttaggagatgaacgagactccatactggctaagtggaaccagctgcaggcctactgg
ggtacagggaagggctactacagcaacaacaacccgcctgtggagtttactcaggagaac
tctttttgcaggttcaaggcagtgggatatagctgcatcccagtaagcaaggatgaagat
ggtttagtggtgctggttctgaataaaaaggaagctgatgttcgagctcagcagcagcag
ctggtcgagtcccttcacaaagtcctgggaagcaaccagactctgtcagttaatgtagat
ggtgtcaaagccctgcccaatgaccagacagaggtcatcatttacttggtggagcgttcc
cccaatggaacctccaagaggatcccatcttccaccttccttgccttcctggagcaggcc
agtgttaaggttcagctgacgcagattggagtgaccatgtcagtcacacgaacagagctc
tccccggctcagctcaagcagctgctgcaaaatgctcctgcaggagtggaccccatcatc
tgggagcaggctaaggtggacaacccggaccctgagaggttaatccctgtgcccatggtt
gggtttaaggagctgctctgcagattgcagatccaggagcagatgactaaacaacaccag
acaagagtggatatcatctccaatgacatcagtgagctgcagaagaaccaggcaacatct
gtggccaagattgctcagtacaagaggaaactgatggacctttctcacagggtcctgcag
gtgctgatcaaacaggagattcagagaaaaagcggttatgccattcaagtggacgaggag
catctcagagtgcagctggacaccatccagtcagaactcaatgcacccacacaattcaag
ggccggttgaatgagttaatgtctcagattcgaatgcagaaccactttggggctgtgagg
tcagaggagcgctacagcgttgatgctggtcttctcagagaaatcaaacaacacttgaag
cagcagcaagatggtttaagtcacctgatcagcgtcattaaagaagacctggaggacatc
aaactgatagagcatggactgagtgatcgtggccacacgagaggaggcatcctgagctga
DBGET
integrated database retrieval system
