Nothobranchius furzeri (turquoise killifish): 107395257
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Entry
107395257 CDS
T05163
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
nfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107395257 (pnn)
03015 mRNA surveillance pathway
107395257 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107395257 (pnn)
03041 Spliceosome [BR:
nfu03041
]
107395257 (pnn)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107395257 (pnn)
Spliceosome [BR:
nfu03041
]
Complex C
Other components
EJC/TREX
107395257 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
107395257
NCBI-ProteinID:
XP_015830078
UniProt:
A0A1A8TZH9
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKSVDDNIRKLTGRDPNESRPGQIRRLSGPMAAGLGGGRGRG
LNLLRRSLSDMGSGGPPAKQRDIQGALLRLAGDQRARRDARHDSDAEDDDDVKKPALQSS
VVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNESSDKLKRRSEIEQ
KLEVQAEAEKKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLLKYIRT
KTKPHLFFLPGKMCSATQKLLEESTKKLNAVFEERREAFAEHLNKMESRPRRQPNREQDA
NIATRTERPAEGKPAGQVDKRTGKRGEKGMDEDEDEEEEVEVEKDESKKTTEGEGTSNVN
EEEKEVLKKIEEDEEEEMEVSQEGKEEKKGEQKGEEGDEEKEEKETSPQSEEMEVEEKAE
KDVVEEKEVETVSQQRLAELQDEKTPGVQISETAESSQEAPDRSDGLAAGEPAVQSRGTE
AASPAQEPQVASTPPVQNPTTPGSNDQEPTNESQTVERESGEEAPQKLPDSQEASGALPV
VTPVKEGEKDGRGRKKEKEQKKRRSQSNSSSSSSGSSSSGSSSSSSSGSSHSSSSSSSSS
SSSSSRSRDGGKRKRRPSDRGRNAKKGDERSHHKKGGSSGGGRDVKERRKRSDEGKGRSS
RSDREHKDGDRKAKRH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcggagcttacaagatcagctcgaaaaagccaaagaaagcttgaaa
agcgtggatgataatattcgcaaactgactggacgagacccaaatgagtcaagaccgggt
cagatccgccggctcagcggccccatggcagcaggcctgggaggaggtagaggcagagga
ctcaacctgctcaggcgtagtctctcagacatggggagcggaggccctcctgccaagcag
agggacattcaaggagccctgttgaggctggcaggagatcagagggccaggagagacgcg
cgtcacgacagcgacgccgaggatgatgacgatgtcaaaaaaccggcgttgcagtcgtca
gttgtagctacctccaaggagcgaacacgccgagatctcatccaggatcagactatggat
gaaaagggcaaacagaggaatcggcgtatgtttggcctgctgatgggaacgctgcagaaa
ttcaagcaggaatcaaacgagtcttcagataagctgaagagacgctccgagatcgagcag
aagctcgaggttcaagctgaggctgagaaaaagaaggtggagaacgaaaagagagaactg
tttgaagagaggagagccaagcagactgagctgagactgctggaacagaaagtggaattg
gctcagctgcaagaggagtggaccagccacaacaatcgcctgctgaaatacatccgcaca
aagaccaagcctcacctcttcttcctgcctgggaaaatgtgctcggccactcagaaactc
ctcgaggaatccaccaagaaactaaatgctgtttttgaggagaggcgtgaggcatttgcc
gaacacctcaacaagatggagtcacgcccccggcgacagccgaaccgcgagcaggacgcc
aacattgctacaaggacggagcgcccagcggagggtaagccagcaggtcaggtagacaag
cggacaggtaaaaggggtgaaaagggaatggacgaagatgaggacgaagaggaagaggta
gaggtagagaaggatgagagtaaaaagacaacagagggagaaggaactagcaatgtaaat
gaagaagagaaagaagttttaaagaaaatagaagaagatgaggaggaagagatggaggta
agtcaggaggggaaagaggagaaaaagggggagcaaaagggggaggaaggggatgaggag
aaggaagaaaaggagacaagtccacagtcagaagagatggaggtggaggaaaaggcagag
aaagatgtggttgaggagaaagaggtagaaacagtcagtcagcagcggctcgcggagctc
caagatgaaaagactccaggtgtgcagatatctgaaacagctgagagcagccaggaagca
ccagaccgcagcgatgggcttgctgcaggagaaccagccgttcagtcccggggcacagag
gcggcttctccggcccaagaaccacaggtggcctccactcctcctgtccagaatcccacc
actcctgggtccaacgaccaggagcccaccaacgagagccagacagtcgaaagagagtcg
ggggaggaagccccacaaaagctgccagattctcaggaggcctctggagcccttcctgtt
gtcactcctgtgaaggagggtgagaaggacggcagagggaggaagaaggaaaaggagcag
aagaaacgccgcagtcaaagcaacagctcctcgtcctcttctggatcctcctccagtgga
agttcctcttcttcttcctcaggatccagccactcctcatcgtcctcgtcctcttcttcc
tcgtcatcaagcagccgcagccgagacggcggcaagcggaagcgtcggccatcggataga
ggtagaaatgcaaagaaaggagatgagagaagtcaccataaaaaaggcgggagtagtgga
ggtgggagggacgtgaaggagaggaggaagaggagcgatgaggggaagggtaggtcttcc
cggagtgatagggagcataaagatggagacaggaaggccaagagacactga
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