Nothobranchius furzeri (turquoise killifish): 107395422
Help
Entry
107395422 CDS
T05163
Symbol
rfwd2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04115
p53 signaling pathway
nfu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107395422 (rfwd2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
107395422 (rfwd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107395422 (rfwd2)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107395422 (rfwd2)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107395422 (rfwd2)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107395422 (rfwd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
zf-C3HC4_2
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
zf-C3HC4
Beta-prop_EML
Beta-prop_DCAF4
zf-RING_2
Beta-prop_WDR90_POC16_2nd
zf-RING_UBOX
WD40_RFWD3
zf-C3HC4_4
Beta-prop_WDR35_TULP_N
zf-C3HC4_3
WD40_like
Beta-prop_Vps41
zf-RING_5
Beta-prop_IFT140_1st
RING_XB3-XBAT31
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
zf-RING_10
Cullin_binding
Sina_RING
Motif
Other DBs
NCBI-GeneID:
107395422
NCBI-ProteinID:
XP_015830288
UniProt:
A0A1A7ZWN9
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSSNRPQSNSGGASSVPSTSSSSAGGSGSTTVTSNGNSSGNVVPSRAIAAGESGLSVPTL
SAVSSRGEFSSLSRPSSTSGSRKRSLHPTPLYNGLLDSYEDKSNDFVCPICFEMIEGAHM
TKCGHSFCFKCIHRSLEVSNKCPKCNCIIDNVAQLYPNFLVNELILKQKQRSEEKRLKLD
HPNGPQWQVFQDILNPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQIFMDFLKEAR
RNKREQLDQLQKELNFLEEDIKRVEEMSGLYSPIMELECTVPNVEASSPAPSSSIIDTPE
YNPPPGFGATTQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITDEGRNLNQLD
DFTECLSKFTRYNTVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEY
GTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFSGQRSKVYQ
EHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLNNSVASIEAKANVCCVKFSPTSRYH
LAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKP
HCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKD
KKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaccggccgcagtcaaacagtggcggggcaagttcggtgcctagcaccagc
agcagtagcgcaggaggcagcgggagcaccaccgtaacaagtaatggtaactcttctggg
aacgttgtaccctcccgggctatagcagccggcgagagcggcttgtctgtaccaactctg
tccgccgtttcgtcccggggcgagttctcttccctcagcagaccatcttcaacctcggga
agcaggaagagatccctccatccaacacctttatacaacggcctgttggattcatacgaa
gataaaagcaatgactttgtctgcccaatttgctttgaaatgatagagggggcgcacatg
acaaagtgtggccacagtttctgtttcaagtgtattcacaggagcttggaggtcagcaac
aagtgtcccaagtgtaactgtattattgacaatgtggctcagctgtaccccaactttcta
gtaaatgagctgattcttaaacagaaacaacggtcagaggagaagagactgaaattagat
catccgaacgggccgcagtggcaggtctttcaggatattttgaatccggatcaggagaac
ctggaccttgcaaatgtcaatctgatgttggaacttctggttcagaagaagaagcagctg
gaagcggaatcccaagcagctcagaggcaaatcttcatggattttctgaaggaagccagg
agaaacaagagagagcaactagaccagctacagaaagagctcaacttccttgaagaagac
attaagcgtgttgaagagatgagtgggctgtactctccaataatggagttggagtgtaca
gtgcccaatgttgaggcttcttctccggcacccagcagcagcatcatcgacacacctgag
tacaacccgcctcccggatttggtgcaacaacccagggaaagagacagacctggtacaac
agcactttggcatcaagacgaaagaggctgacggctcactttgaggatctggagcagtgc
tacttctccaataagatgtcaagaatcacagatgagggcaggaacctgaaccagctggat
gatttcacggagtgtttatctaaattcacccgctacaacactgtgcggccgctagccacc
ctctcctatgccagtgacctctataatggctccagtattgtctctagtattgaatttgac
cgtgactgtgactacttcgccatcgctggcgtgaccaagaagatcaaggtgtttgagtat
ggaacggtgatccaggatgctgtagacatccactaccctgtcaatgaaatgacgtgcaat
tccaaaatcagctgtatcagctggagcagttatcacaagaaccttctggccagcagcgac
tatgaagggaccgtcattctgtgggatggattcagtgggcagcggtccaaagtgtaccag
gagcatgagaaaagatgttggagtgttgacttcaacctgatggaccccaagctcctagcc
tcgggttctgatgatgctaaagttaaactgtggtcaaccaacctgaacaactcagtggct
agcatcgaggctaaagctaacgtctgctgtgttaaattcagcccaacttccagatatcat
ctggccttcggctgtgcggatcactgcgtccactactacgatcttcgcaacactaagcag
ccaatcatggtgttcaaaggccacaggaaggccgtgtcctacgccaagtttgtaaacgga
gaggagattgtttctgcgtcaacagacagccagctgaagttgtggaacgtcaacaaacct
cactgcctgcgttccttcaagggtcacattaatgagaagaactttgttggactggcatcc
aacggagactatgtcgcctgtggcagtgagaacaactccttgtatctgtactacaaagga
ctttccaagacgctgctaacgttcaagtttgacacggtgaaaagcgtcctggacaaggac
aagaaggaagatgacaccaacgagtttgtcagcgcggtctgctggagggccctgcctgat
ggagagtcaaatgttctcattgctgcaaacagtcaaggaacaatcaaggtacttgagctt
gtgtga
DBGET
integrated database retrieval system
