Nothobranchius furzeri (turquoise killifish): 107395752
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Entry
107395752 CDS
T05163
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107395752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107395752
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107395752
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107395752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
107395752
NCBI-ProteinID:
XP_015830689
UniProt:
A0A1A7ZJI5
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGTWLTNTIDMLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHI
RMLETILRMLDNDSVQVDAIKKIKDDVEYYIDSSQDPDFEENEFLYDDLDLDDIPQSLVA
TSPPGHSHLEDEIFQNSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSCSSSSSSVSGLTSSSSLVSMATITGGGSGGSGGNIHHSSI
SNTSAGSYSNATQQPPHPSTQQQAKNLVSSLAPISNSSATTNSHVTSLASSPPDAITQGL
FTSNSQPLAPSGLTSTSNSLGLSLGLSLGKGGMSSSITNSSLSGGLGLSGMPASLSTMAS
LLSSSTPTPYAQAAASGTGSSGLLGSLGGVSTTPTNNAIGPIGSGSIAVGGPTSSTGGML
NAAPGVGSVGSGILGLGSGQSGVQGSSLVSQSPVGSLAPGSGVGVIGSNGGSLGLVGSGV
GGGNSSLSVRPPSQQKQNGSTSYSAVVADSTTDSALSSATQSQSSQSSSLTSTANHFKDM
GPGLLGSLTLSSSSPSPASFSEAKTVSLLNGPLSYSQSSDSIKEPLSSLKSMAEQAALTS
GIEGDVASLHLTSDIFPSSTTASSGPPSAPQPSLSEVSILLSLGVCPLGPVPLSKDQLYQ
QAMQEAVWTHMPHPSDSERIRQYLMRNPSPTPPFHHQVPPPHSDTVEFYQRLSTETLFFI
FYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQ
RKKEGFTFEYRYLEDRDLQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggggttgagcagtttgaagacatttggcaaaagcttcacaatgcagctaatgctaaccag
aaggagaaatatgaagcagacctcaagaaagagatcaaaaagctacagcgacttcgagac
cagatcaagacttgggtggcatccaatgaaatcaaagacaagaggcagctagtagaaaac
cgcaaactcatagaaacgcaaatggagaggtttaaaatagtggaacgagaaaccaagaca
aaagcttattctaaagaagggctcggtctggcccagaaagtggacccggcgcagagggag
aaggaggaggtcggcacatggctaacgaacacgatagacatgttgaacatgcaggtggac
cagtttgagagcgaagtggagtctctctccgtccagacgagaaagaagaaaggagacaag
gagaagcaggaccggatcgaggagctgaaaaagttcatcgagaagcatcggtaccacatc
cggatgctggagacgatactgaggatgctggacaacgactctgtacaggtcgatgccatc
aagaagatcaaggatgatgtagagtactacatcgactcatcgcaggacccagactttgaa
gagaacgagttcctctacgatgacctggacctggatgacattcctcagtcgctggtcgcc
acctctccgccggggcactcgcacctggaggacgagatcttccagaactccagcagcaca
cccacctccaccacctcgtcctcccccatccccccttcacctgccacttgcactacagag
aactcagaagatgacaagaagagaggacgatcaacagacagtgaagtcagccagtcgcct
gtaaaaaatggaaatccctcctcttcgttgtcttcctcttcctcgtcgtcgtcctcctcc
tgctcttcttcttcctcttccgtctcgggtttgacctcctcctcctccctggtctctatg
gcgaccatcactggtggaggaagcggcgggtctgggggaaacattcaccacagcagcatt
tccaacacttcagctggcagctacagcaacgccacccagcagccgcctcatccgtcgacg
cagcagcaggccaaaaacttagtgagctctttagctcctatctccaactccagcgcgacc
accaacagccacgtcacctccttggcgtcctcgccgcccgacgccatcacgcaggggctt
ttcacgtcgaactcccagcctctggctccttcgggactgacgtcgacctccaacagcctg
ggcctcagtctggggctgtctctgggaaaaggtggaatgtcaagctccatcacaaacagc
tcgttgtcggggggcctcggcctgtcagggatgccggcatctctgagcacgatggcgagc
cttctgtccagctccaccccaaccccctatgcccaggcggccgcctcaggcacgggcagc
tcaggcctactgggctctctcggaggcgtcagcaccacgccgaccaacaacgcgatcggc
cccatcggcagcgggagcatcgccgtcggcgggccgacgtcctcaacaggaggcatgctc
aacgcagctcccggagtgggcagcgtcggctccgggattctgggtctgggttcgggccag
tcaggagtccaggggtcttccttggtgtcgcagagccctgtgggaagtttagccccagga
agcggagtgggagttatcgggagcaacggaggcagcttaggactggtggggagcggagtc
gggggaggaaactcatcactgtctgtccgaccgccgagccaacagaagcagaacggtagc
accagttacagtgctgtagtagcagacagcacaacagactccgcccttagcagtgccacc
caatcacaaagcagccaatcctcatccctgacttctacagccaatcactttaaggacatg
ggtcccggtctactgggctctctgacgttgtcgtccagctccccttcgcccgcctccttc
agcgaggcgaaaaccgtgagcctgctgaacgggccgctgtcctactctcagtcatctgat
agcatcaaggagcctctgagcagcctcaagtccatggccgagcaagcagcactcacctca
gggatcgagggagacgtggcctccctgcaccttacttcagacatcttccccagcagcact
acggcctcatcaggccccccatcagcacctcagccctcgctgtcagaggtcagcatcctc
ctgtccctgggggtgtgtccgctggggccagttcccctttccaaagaccagctctaccaa
caggccatgcaggaggcagtgtggacgcacatgcctcacccgtctgactccgagaggatc
aggcagtaccttatgaggaacccgagccccaccccacctttccaccaccaggtgccacca
ccccactcagacactgtagaattttaccagaggctttccacggagaccctgttcttcatt
ttttactacctggagggcactaaggcccagtatctggcagccaaagccctgaagaagcag
tcctggaggttccacactaaatacatgatgtggttccagaggcacgaagagcccaagacc
atcaccgatgagtttgagcagggaacgtacatttacttcgactatgagaagtggggccag
aggaagaaggagggcttcacgtttgagtatcggtacctggaggaccgggacctccagtga
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