Nothobranchius furzeri (turquoise killifish): 107396230
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Entry
107396230 CDS
T05163
Symbol
park2
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04120
Ubiquitin mediated proteolysis
nfu04137
Mitophagy - animal
nfu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107396230 (park2)
04120 Ubiquitin mediated proteolysis
107396230 (park2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107396230 (park2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107396230 (park2)
04121 Ubiquitin system [BR:
nfu04121
]
107396230 (park2)
03029 Mitochondrial biogenesis [BR:
nfu03029
]
107396230 (park2)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
107396230 (park2)
Membrane trafficking [BR:
nfu04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
107396230 (park2)
Aggrephagy
Other aggrephagy associated proteins
107396230 (park2)
Xenophagy
Other xenophagy associated proteins
107396230 (park2)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
107396230 (park2)
Mitochondrial biogenesis [BR:
nfu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
107396230 (park2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR_1
ubiquitin
IBR
Rad60-SLD
LEA_1
Motif
Other DBs
NCBI-GeneID:
107396230
NCBI-ProteinID:
XP_015831320
UniProt:
A0A1A8VKL5
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MIVFVRYNLGPGVAVELQEEASVAELKEVVGSRQGVSPEELRVLFAGRELQSSTSLQGCD
LPEQSTVHVVHPPPGSSSSQLLLLQEHLSPVREKEQRRLTRLDLSSSRLPATSSGLAVIL
EANVRGGEGGATGGEEVEKTRGATGGEVDKTRGATGGEEGCADERVQRSEQQAEAQKDVR
VCSTFFVYCKSCSSIQPGKLRVRCWVCKETTLTLSRGPSCWDDVLLPGRIHGLCQADGCH
GNTAEFYMKCASHPTSEDDTSVTLDLIMMNIRNVPCIACTDITEVVLVFQCAARHVICLD
CFCRYCQTRLNERQFVYHSVIGYSLPCAAGCEDSLVKELHHFRILGDEQYGRYQQYGAEE
CLLTLGGLLCPSPGCGAGLLPPNGIRRVECDRQLGCGFIFCRDCRGPYHEGACQVMPAPP
TSRDSSQGFVVAEEASQQGRWDRASLLLIQESTKRCPRCSVPVERNGGCMHMQCSLCRAE
WCWLCGVPWNRECMGNHWFG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgtttgtgcggtacaacctggggcctggtgtggccgtggagctgcaggaggag
gcaagtgtggctgagctcaaggaggtggtggggagtcgacagggagtcagtccagaggag
ctccgagtgctgtttgctggcagggagctgcagagttccacctccctgcagggttgtgac
cttcctgagcagagtaccgtccatgtggtccaccctcctccaggctcttcctcctcccag
ctcctcctcctgcaggagcacctgtctccagtcagagagaaggagcagcgtaggctgacc
aggttagacctgagctcctctcgtctcccagcaacctcctcaggacttgctgttatccta
gaggcaaatgtgagaggaggggaaggaggagcaacaggaggagaagaagtagaaaaaaca
agaggagcaacgggaggagaagtagacaaaacaagaggagcaacaggaggagaggagggt
tgtgctgatgagagagttcagagatcagagcagcaagctgaggctcagaaagatgtgcgt
gtctgtagtactttctttgtgtactgtaaaagctgcagttccattcagcctggaaaactt
cgcgttcgctgttgggtctgcaaagagacaacgttaacgctcagtaggggtccatcctgc
tgggacgatgtccttcttccaggaagaatccatggcctctgtcaggccgacggttgtcat
ggtaacacagcggaattctacatgaaatgtgcgtctcacccaacatcagaggatgacacg
tctgtgacccttgacctcattatgatgaatatcagaaacgtcccatgcatcgcctgtacc
gacataacggaggtggtcctggtcttccagtgtgcagcgcgccatgtgatctgtctggac
tgtttctgccgctactgtcagactcgcctgaatgagcgacagtttgtgtatcactctgtg
attgggtattctcttccatgtgcagctggctgtgaggactctctggtaaaagagttgcat
catttcaggattctgggagatgaacagtatgggcggtaccagcaatatggggcggaagag
tgtctgctgacccttggaggcctgttatgtccctcacctggctgcggggcgggacttcta
ccacccaacggcatcaggagggtggagtgtgacagacagctaggctgtggcttcatcttc
tgcagggactgcagaggaccatatcatgagggggcatgtcaggtgatgccagctccaccc
acctcacgtgactcttcacagggttttgttgttgcagaggaggcatctcaacaggggagg
tgggaccgggcatctctgctcctcatccaagagtcaaccaaacgctgccctcgctgctcg
gttcctgtggagagaaacggtggctgcatgcacatgcagtgctccctctgcagagctgag
tggtgctggctgtgtggcgttccctggaaccgagagtgtatggggaaccactggtttgga
taa
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integrated database retrieval system
