KEGG   Nothobranchius furzeri (turquoise killifish): 107396292
Entry
107396292         CDS       T05163                                 
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nfu04121]
    107396292 (wdtc1)
Ubiquitin system [BR:nfu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107396292 (wdtc1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st ANAPC4_WD40 TPR_19 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd TPR_2 Beta-prop_IFT122_1st TPR_1 ANAPC3 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR19_1st TPR_16 Beta-prop_IFT140_1st TPR_17 TPR_6 TPR_9 TPR_Slam TPR_11 Barstar
Other DBs
NCBI-GeneID: 107396292
NCBI-ProteinID: XP_015831401
UniProt: A0A8C6PQE8
LinkDB
Position
Unknown
AA seq 670 aa
MSAVNITREILHRQIRDKRASGFQRFYHVTDPFIKRLGLEAELQGHTGCVNCLEWNENGD
LLASGSDDQHAIIWDPFKHKKLTTMHTGHAANIFSVKFLPHSGDRILITGAADTKVHVHD
LTVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRENSKHSEVLIDLTEF
CGQLVEAKCLAVNPRDNNYLAVGANGPYVRLYDVRMIHNYRKSLSQSTSAAVHTFCERQK
PIPDGAGQYYVAGHLPVKLRDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFK
QRPYTFFLPKKCSPPTGDVQNGKTTNGVSNGVHLPASYICFTGSKVHSSSTELPPHLEVM
KQQANDAFARQQWTQAIQLYSLSIHQASSNAMLYGNRAAAYMKRKWDGDHYDALRDCVKA
LTLNPGHLKAHFRLARCLFELKYVSEALECLDDFKGKFPEQAHSSACDGLEKDIKAALFS
KSESAEDKKGNSSIRFHSFSRKESIPEDEVWLRECSFDYKHRYCGHCNTTTDIKEANFFG
SQGQYIVSGSDDGSFFIWEKETANLVRILQGDESIVNCLQPHPSYCFLATSGIDPVVRLW
NPRPETDGENGRVVEDMEGAAQANQRRMNADPLEVMLLNMGYRITGLRGVGPDGSDDEDS
SEGQVQCRPS
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgagtgctgtcaacatcaccagagaaatcctacacaggcagatcagggacaagagagcg
tctggatttcaaaggttctaccatgtgactgaccctttcattaagagacttgggctggaa
gctgagcttcagggccataccggctgtgtgaactgtttggaatggaacgaaaatggagat
ctgctggcttcgggttcagacgaccaacatgctatcatttgggatccattcaaacacaag
aagcttacgactatgcacacaggtcacgctgctaatatattctctgtgaagttcctgcca
cactctggggacaggatcctgataacgggtgcagccgacaccaaggtccacgtacatgac
ctgacggtgaaggaaaccatccacatgttttcagatcataccaacagagttaaacgcatt
gccaccgcccccatgtggcccaacaccttctggagtgctgcagaggacggcatcatcaga
cagtacgacctgcgggagaacagtaagcactctgaggtgctgatcgacctgacggagttc
tgcggtcagctagtcgaggctaagtgtctagcagtcaacccgcgggataataactacctg
gctgtgggagctaatggcccctatgtccgcctctatgacgtcaggatgattcacaactac
agaaaatcactgagtcagagcacgtcggctgctgtgcacaccttctgtgaacggcagaag
cccatcccagatggagcagggcagtattatgtagcagggcacctgcccgtgaagctgaga
gactacaacaaccgcctgagggtcctggtggccacgtacgtgaccttcagtccagatggc
accgagctgctggtgaacatgggcggggagcaggtgtatctgtttgacttaacattcaag
caaagaccgtataccttcttccttcctaaaaaatgctcgccgccaacaggagatgtgcag
aatgggaagacgacaaacggcgtctccaatggagttcatttgccagccagctatatttgt
tttactggaagcaaagtacactcgagttctactgagcttcctcctcacttggaggtgatg
aagcaacaagctaacgacgcgtttgcacgccagcagtggacgcaggccatccagctgtac
agtttaagcattcatcaggccagcagcaacgccatgctttatggaaaccgcgcggcagcc
tacatgaaacgcaagtgggatggagaccattacgacgccctgagggactgtgtgaaggct
ctcacactgaacccggggcatctgaaagcacatttcaggctggcgcgctgtctgtttgag
ctgaagtatgtgtctgaggccctcgagtgtctagatgacttcaaaggaaagtttccagaa
caggctcacagcagtgcctgcgatggcttggagaaagacatcaaggctgcacttttctcc
aaatcagaatcagcagaggacaagaagggaaacagctccatcaggttccattcgttcagt
cggaaagagtccatccccgaggacgaggtctggttgagggagtgcagttttgactacaag
caccgatactgtggccactgcaacaccaccaccgacatcaaggaggccaacttctttggg
agccaaggccagtacattgtgagcggctctgacgacggctctttcttcatctgggaaaag
gagacggctaatctggtgaggatccttcagggggatgagtcaatagttaactgcttacag
ccacaccccagctactgcttcctggctaccagtgggattgaccccgtggttcggctatgg
aaccccagaccggagaccgatggtgagaacgggcgagtagtggaggacatggagggagct
gctcaggctaaccagcggcgtatgaacgctgacccactggaggtaatgctgctaaacatg
ggctatcgcatcacgggcctgcgtggggtcggcccagatggttctgatgatgaagacagc
tcagagggacaagtacagtgcaggccgagctaa

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