Nothobranchius furzeri (turquoise killifish): 107396331
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Entry
107396331 CDS
T05163
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107396331 (zeb1)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
107396331 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_15
zf-Di19
Homeodomain
zf-met
zf-C2H2_6
zf-C2HC_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
107396331
NCBI-ProteinID:
XP_015831482
UniProt:
A0A8C6P2P7
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MADGPRCKRRKQANPRRTSVANYSSVVEPGSDSDDEDKLHIVEEDGSLADAAECDSTLPD
DELPSGHSWDLVKADCASEGEDDLSTDALVEEMLQQGDTAIIYPEAPDDDPNRQGTPDAS
IHDENGTPDSFSQLLTCPYCSRGYKRYSSLKEHIKYHHEKTGESFSCTECSYSFAHCAQL
ERHMNIHKFGRDQKHTTQSTGNRKFKCSECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISVISPNSRQRLSARSQSQAPSPVLPPSPSVHCSQIREKLEHS
KTLQEQLPLHQVKVEPADYEYKPAALTPPPLTGGVFSGGAAASLQGTVQAVVLPTVGLVS
PISINLVDLQKALKVAVDKNVIRQVLESNSKGQMNSGLTTGAVQQQLISAINLPIVGQDG
NAKIIINYSLDPSQGQLTSHNLNKEQKPVSPTQTAPDMFKFQKLPEDPIVRGCRAHGEKT
TRTCLLCDNCPGGLEDLHALKHHKKGGVLLNGAGLNKSESAVSALLSGEGLCNQPKNVLS
LLKAYFALNAEPSKDELAKISDSMSLPILMVKKWFDKMQEGQISFGAPTPPSEEEDSCDA
HTVVSLVQKENTATMMPTVSQGSPTEATPAEVNGAHSSPASPTPLNLMAGSPILADDPQS
TEGPLDLSLPKQAREEADTAIPAACVYTSASSGADREEEPLNLTCTRKDTLPLSAIGGSP
VELYASQPSAKPLDIVTTMQCLKALSTTNKQTILIPQLAYTYTTTANSPAGTQMDETIHL
NGITEESSIDEQNDSDSGPARKKMKKTDGSMYACDLCDKIFQKSSSLLRHKYEHTGKRPH
ECSICNKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKDTQS
QAGDQDSPEEDGETRPDMQNQHMVPLLLDSDERGGSTREDEESEEEEEGMVDMDDIQVVQ
IGEEGGDNETEEQEGRCNKGIVVVSREKEEEKAEMEEDEEASTKQEVLESLDGEEDIHMK
EEEEEAEAMGTEGGVTEETYGEVPDKIEDETSRSKNPEDEKDPQKDEEQ
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaggaggaccagcgtg
gccaactacagcagcgtggtggagccgggctcagactcagacgatgaagacaagctacac
attgtggaggaggacggcagcctggcggatgcagctgaatgtgacagcacgctgccagac
gatgagctcccgagcgggcacagctgggatctagtcaaggcggactgtgcttcagagggt
gaggatgacttgagcacggatgccctggtggaggagatgctccagcaaggggacacggct
atcatttatccagaggctccagatgatgatcctaatcggcaagggacccccgatgccagc
atccatgatgagaacggaactccagattccttctcccagctgctcacgtgcccttactgc
tcacggggctacaagcgctacagctccctgaaggagcacatcaagtaccatcacgagaag
accggggagagcttcagctgcacagagtgcagctacagctttgcacactgtgcacaactg
gagcgtcatatgaacatccacaagtttgggcgcgatcagaagcacaccacacagtcaaca
ggcaacaggaagttcaaatgcagcgagtgtggtaaagcttttaaatacaagcaccacctg
aaggagcacctccgcatccacagtggagagaaaccctacgagtgctccaactgcaagaag
cgcttctcccactccggctcatacagttcccacatcagtagtaagaagtgcatcagtgtc
atctcaccaaacagcaggcagcgactgagtgccagaagccagtcccaggctccgtctcca
gtcctcccaccatcaccttcagtccattgcagccagatcagggagaaactggagcacagc
aaaaccttgcaggagcagctccctcttcaccaggtcaaggtagaacctgcggactatgag
tacaagccagcagcactgacgcctcctcctctgactggtggggttttcagcggaggtgct
gcagcctctctgcagggaacagtgcaggcagtggtcctgcccacagtggggctggtgtca
cccatcagtatcaacctggttgacctgcagaaggcactcaaagttgcagtagacaaaaac
gtcattcgccaggtgttggaaagcaactccaaaggtcagatgaactcggggttaactact
ggagcagttcagcaacaactcatttcagccatcaatctgcccattgtgggtcaggatgga
aatgcaaaaattattataaactacagtctggatcccagccagggccagctcacatcccat
aacctgaataaagagcagaaaccagtttctccaactcagactgctcctgacatgttcaag
ttccagaaactccctgaggatcctattgtcagaggctgcagggcccacggggagaagaca
acaagaacgtgtctcctgtgtgacaactgtcccggagggctggaagaccttcatgccctc
aaacatcacaagaaaggtggtgtcttgctgaatggagcgggcctgaataagtctgagtct
gccgtttctgctttgctgtcaggtgaaggactctgcaaccagcccaagaatgtcttgtct
ttactcaaggcctactttgccctaaatgcagagccctccaaggatgaactggccaagatc
tctgactccatgagtctaccaatccttatggtaaagaagtggtttgacaaaatgcaagaa
ggccagatatcctttggtgctccaactcctccctcagaggaggaagattcctgtgatgcc
cacactgtagtgtcacttgtccaaaaagagaatacagccactatgatgcccactgtgagc
cagggcagccccacagaggccacgccagcagaggtcaatggtgctcacagttcacctgcc
tcccccacaccattaaacctcatggctggtagtcccatcctagctgacgacccgcagagc
accgagggacccctggacttgtcgctgccaaaacaagctagagaagaagctgacacagca
atacccgcagcctgtgtttacacttctgcttcctctggtgctgacagagaggaagaaccc
ctgaacttaacttgcacaaggaaagacacgttgccactctcagcaatagggggtagccct
gttgaactgtacgccagccagccaagtgccaaaccccttgacattgtcaccacaatgcaa
tgcctgaaagcgctatccaccactaacaaacagactatcctgatcccccagctggcttac
acctataccactacagctaacagcccagctgggacccaaatggacgagaccatccatctc
aacgggatcacggaggagagcagcatagacgaacagaatgattctgattctggtccagcc
aggaagaagatgaagaagaccgatggcagcatgtacgcctgtgacttgtgtgacaagatc
ttccagaaaagtagctcgctgctgagacacaaatatgaacacacagggaagcgacctcat
gagtgcagcatctgcaacaaggccttcaaacacaaacaccacctgattgaacacatgcgg
ctccactcgggggagaagccgtaccagtgtgacaagtgtgggaaacgattctcccactcc
ggctcctactcccagcacatgaaccaccgctactcctactgcaagaaggacacgcagagc
caagcaggagatcaggatagccccgaggaggatggagagacccggcccgacatgcagaat
cagcacatggtccctttactgctagactcggacgaaagagggggcagcaccagagaggat
gaggagagtgaagaagaggaggagggcatggtggatatggacgatatccaggtggtgcaa
ataggagaggagggaggagataatgagacagaggagcaagaggggaggtgtaataaaggg
attgtagtggtgagcagagagaaagaggaagaaaaagcagaaatggaggaggatgaggag
gctagcacaaagcaggaggtgctggagagtctcgatggagaggaagacattcatatgaag
gaggaggaggaggaggcagaggcaatgggtacagaaggaggtgtaacagaggaaacatat
ggggaggtcccagataagattgaagatgaaacatccaggagcaagaatcctgaagatgag
aaggatccccagaaggatgaggagcagtag
DBGET
integrated database retrieval system
