Nothobranchius furzeri (turquoise killifish): 107396444
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Entry
107396444 CDS
T05163
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04517
IgSF CAM signaling
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107396444
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107396444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107396444
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107396444
Intermediate filaments
Intermediate filament-binding proteins
107396444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PMC2NT
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
107396444
NCBI-ProteinID:
XP_015831669
LinkDB
All DBs
Position
Unknown
AA seq
2341 aa
AA seq
DB search
MTSVAAEFDHMEIQQQYSDGVNNRWDADDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEHHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYTPREGKLISDINKAWERLEKAEHERELALRTELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELEAESYHDIKRITARKDNVIRLWEYLLELLKARRLRLEQNLGLQRVFQEMLYI
MDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVRNVNSNAQKFAADTDG
YKPCDPQIIRDRVTHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSEDYGKDLTGAVRLLSQHKAFEDEMSGRAAHLQQTIRQGQELVADNHFGAEKIKERIQ
DIQEQWAALERLSAVRKARLQEACNQHQFQADADDIDTWMLDVLRIVSSVDVGHDEFSTQ
ALVKKHKDVAEEIGSYRPVIDALHEQARTLPPEKAGSEEVQNRLAGIEERYKEVAELTRL
RKQALQDALSLYKMLSEARACELWIDEKEQWLNSTEIPEKLEDLEVVQHRFESLEPEMNS
QASRVAVVNQVARQLVHSGHPSEKEIKAQQDKLNTRWSQFRDLVDQKKENLNSALGVQNY
HLECNETKSWIKEKTKVIESTQELGNDLAGVMALQRKLTGMERDLVAIEDKLSDLGKEAE
RLGSEHAEQSKAIKERLSEITGVWGEMKDSLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLAQHEGIKNEVRNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEAAEAAIKKQEDFMTTMDANEEKISGVVDTGRRLVTDGNVNAERIQEKVDSIDQRHKKN
RHAANDLLTRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELQSNKEWLDKINKEGQTLMSEKPDTEAMVKEKLSSLTTMWADLESTTQTKAKCLFDAN
KAELFTQSCADLDKWMAALDGQLQSDDYGKDLTSVNILLKKQQMLESQVEVRQKEVEELQ
KQSQALSQEGKGSEEVDGQRISVEKKFHALQAPLKNRRDNLMASREIHQFNRDVEDEILW
VEERMALATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRYDDIFERSQHILREGSPTAE
LIRQRLTDLQSLWDQMKKETEKRHARLSEAHEAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSSVAMLKKHQILEQAVEDYADTVHQLSSTSRGLVAAEHPDSERIGMRQSQVDKLYA
GLKDLAEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDGVNRLADDLINSGHGDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAVRLQSAYAGDKADDIQKREGEVLEAWRNLLEAAEGRRVKLVDTGDKFRFFGMVR
DLMLWMEDVTRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTSCIELGKALLARK
HYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFSRDAGVAEAWLLGQEPYLS
SREIGQNVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRRRQEEEEKKRQPD
EAQAADAAAQRREGEPVSQNGLQSEQESPRDAVDGGDVVNGVSEPSPSGSPGASRKSKPS
QAATLPAKTQQDAPTSQLEAFLHRKHEWEGHNKKASNRSWHNVYCVINNQEMGFYKDQKS
ASQGIPYHSEIPVSLKDAVCEVAVDYKKKRHVFKLKVTDGNEYLFQAKDDEEMNTWISTI
SAAVAGVEKSEVTPSSHSTPAPAARAQTLPASVATTTAAESSPGKREKDKEKRFSLFSKK
K
NT seq
7026 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagtggcggcagagttcgaccacatggagatccagcagcagtacagcgatggc
gtcaacaaccgctgggacgcagacgactgggacaacgagaacagctcggcacggctgttc
gagcgctcacgcatcaaagctctcgcagatgagcgcgaggccgtccagaagaagaccttc
actaagtgggtcaactcccacctgtcccgggtttcctgcagaatcacagacctgtacatg
gacctgagggatggacgcatgctcatcaagctgctggaagttctgtctggagagagactg
cccaaacccacgaagggtcggatgaggatccactgtctggagaatgttgataaagctcta
cagttcctgaaggagcagagggtccacctggagaacatgggttctcacgacattgtggat
gggaaccaccgactgactctgggcctcatctggaccatcatccttcgcttccagattcag
gacatcagtgtggagacggaggacaacaaggagaagaagtctgctaaagatgctctgctg
ctctggtgtcagatgaaaactgctggatatccaaacgtcaacatccataacttcaccacc
agctggagagacgggatggccttcaacgctctgatccacaaacacaggcccgacctgatc
gactttgataaactgaagaaatcgaacgctcactacaacctgcagaatgccttcaacctg
gctgagcatcacctcgggctcaccaagctgctggaccccgaagacatcagcgtggaccac
cctgatgagaaatccatcatcacctacgtggtcacctactaccactacttctccaagatg
aaggcactgaaggtggaggggaagagaatcggcaaggttctggataatgccattgagacg
gagaagatgattgagaagtacgagtctctggcgtccgacctgctggagtggatcgaacag
accatcatcatcctcaacaacaggaaattcgccaactctctggttggagtccagcagcag
ctgcaggccttcaacacctaccggaccgtggagaaaccaccaaagttcacagagaaagga
aacctggaggttcttctgttcaccatccagagtaaaatgagagccaacaatcagaaggtt
tacactcctcgagaggggaagctcatctctgacatcaacaaggcgtgggagcgtctggag
aaggcggagcatgagcgtgagctggcgctgaggacagagctgattcgtcaggagaaacta
gagcagctcgcccggcgattcgaccgtaaagccgccatgagggagacgtggctgagcgag
aaccagagactggtctcacaggataactttggatttgacctccaagctgttgaagccgcc
accaagaagcacgaagccatagaaacggacatcgccgcctacgaggagcgagtccaggcc
gtggttgccgtggcgaaggagctggaggcggagagttaccatgacatcaaacgcatcacg
gccaggaaggacaacgtgatccgtctgtgggagtacctgctggagctgctgaaagcccgc
agactgaggctggagcagaacctgggcctgcagagagtcttccaggagatgctctacatc
atggactggatggacgagatgaagatgctgctgctctcccaggattatgggaaacacctg
ctgggggtggaggacctgctgcagaaacacgctctggtggaggctgacatcggcatccag
gccgaccgggtccgaaacgtcaacagcaacgctcagaagttcgctgcagacaccgacggt
tacaaaccctgtgatcctcagatcatcagggaccgggtcactcacatggagttctgctac
caggagctgactcagctggcagctgagcggcgagctcgcctcgaggagtcccgacgcctg
tggaagttcttctgggagatggccgaggaggaagggtggatcagggagaaggagcagatc
ctgtcctctgaggattacgggaaggatctcacgggtgccgtcagactgctgagtcagcac
aaagccttcgaagatgagatgagcgggcgagccgcccacctgcagcagaccattagacag
ggccaggagctggtggccgacaaccactttggagccgagaagatcaaagagcggatccag
gacatccaggagcagtgggcggctctggaacggctctctgctgttcggaaggctcgtctg
caggaagcctgcaaccagcaccagttccaggctgatgctgacgacatcgacacatggatg
ctggacgttctccggatcgtctccagcgtcgacgtgggccacgatgagttctccactcag
gctctggtgaagaaacacaaagatgtggcggaggagatcggcagctaccgacccgtcatc
gacgcgctgcacgagcaggcccggacgctgccgccggagaaggccggctcagaggaggtc
cagaaccggctggcgggtatcgaggagcgatacaaggaggtggcggagctgacccggctc
aggaagcaggcgctgcaggacgccctgtcgctctacaagatgctgagtgaagctcgtgcc
tgtgagctgtggatcgatgagaaggagcagtggctcaacagcacggagatcccagagaag
ctggaggacctggaggtcgtccagcaccggtttgagagtttggagccagagatgaacagt
caggcctctcgggtcgcggtggtcaaccaggtggcccggcagctggtccacagtggacat
cccagtgagaaggagatcaaagcccagcaggacaaactcaacaccagatggagtcagttc
agagacctggtggaccagaagaaggagaaccttaactcagctctgggagtccagaactac
cacctggagtgtaacgagaccaagtcctggatcaaggagaaaactaaggtgatcgagtcg
acccaggagctcgggaacgacctggccggcgtcatggcgctgcagagaaaactgactggg
atggagcgggacctggtggccatcgaggacaagctgagcgacctgggcaaggaggcggag
cggttaggttctgaacatgcagagcagtccaaggccatcaaagaacgtctgtctgagatc
acgggtgtctggggcgagatgaaggactcgttgaagaaccgtgaggagtctctgggtgag
gccagcaagctgcagcagttcctacgagacttggatgacttccagtcctggctttcccgg
acccagaccgccatcgcctctgaggacatgcccaacacgctggccgaggctgagaagctg
ctggcccagcacgagggcatcaagaacgaggtccgcaactacgaggaggactaccagaag
atgcgggacatgggtgagatggtgacgcagggtcagacagacgctcagtacatgttcctg
agacagcggctgcaggcgctggacaccggctggaacgagttgcacaagatgtgggagaac
cgacagaacctgctgtcccagtcccatgcctaccagctgtttctgagggacaccaagcag
gccgaggccttcctcaacaaccaggagtacgtcctggctcatactgagatgcccaccact
ctggaggcagctgaggccgccatcaagaagcaggaggactttatgaccactatggatgcc
aacgaggagaagatcagcggggtggtcgatactgggcgtcgcctggtcactgatggcaat
gtcaacgctgagcgaatccaggagaaggtggactccatcgaccagaggcataagaagaac
cgacacgccgccaatgacctgctgaccaggctgaaggacaacagagacctgcagaagttc
ctgcaggactgtcaggagctgtccctgtggatcaacgagaagatgctgacggctcaagac
atgtcgtacgacgaggccaggaacctccacagcaagtggctcaaacaccaggccttcatg
gccgagctgcagtccaacaaggagtggctggacaagatcaataaggaaggccagacgctg
atgtcagagaaacctgacacggaggccatggtgaaggagaagctgtcgtccttgacgacc
atgtgggctgacctggagtccaccacccagaccaaagccaagtgtctatttgacgccaac
aaggcagagctgttcacgcagagctgcgctgacctggataagtggatggcggctctggac
ggacagctccagtcggatgactacggcaaagatctcacctcagtcaacatcctgctgaag
aagcagcagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctgcag
aaacagtcccaagccctgagccaggaggggaaaggctcggaggaggtggacggtcaaagg
atcagtgtggagaagaagttccacgccctccaggcacctctgaagaacagacgggacaac
ctgatggcctcgcgcgagatccaccagttcaacagagatgtggaggatgagattctctgg
gtggaggagaggatggctctggctacctccacagaccatggacacaacctgcagactgtt
cagctgctcatcaagaagaaccagacattgcagaaggagatccagggtcaccagcctcga
tatgacgacatctttgagcgcagccagcacatcctgagggagggcagccccacagctgag
ctgatccgccaacggctcaccgacctccagtcgctttgggaccaaatgaagaaggagacg
gagaagcgacatgcccgcctcagcgaggcccacgaggcccaacagtactactttgatgcc
gctgaggcagaggcatggatgagcgaacaagagctctacatgatgtcagaggagaaggcc
aaggacgagcagagttcagtggccatgctgaagaagcatcagatcctagagcaggcagtg
gaggactatgccgacaccgtccaccagttgtccagcaccagccgtggcctggtggccgcc
gaacaccccgacagcgaacgcatcgggatgcgccagtctcaggtggacaagctgtacgca
ggcctgaaagatctggccgaagagcgtcgaggaaaactggatgagcgtttccggcttttc
cagctcaatcgggaagtggatgacttggagcagtggatcgctgaaagggaagtggtggct
ggatctcatgagcttggacaggactacgagcacgtcaccatgctgcaggagcgtttcaga
gaatttgcccgtgacacaggaaacattggccaggagcgcgtggacggcgttaaccggctg
gcagacgatttgatcaactcaggccacggcgatgccgctaccatcgctgagtggaaggac
ggcctgaacgaggcctgggctgacctgctggagctcattgacacccgcacgcagatcctt
gctgcctcctatgagctgcacaagttctaccacgatgccaaggagatcctcaaccggatc
ctggacaaacacaagaagcttccagaggagctgggccgagaccagaacacggtggagacc
ctgcagaggatgcacaccaccttcgaacacgacatccaggctctgggaacgcaggtccga
cagcttcaggaagacgccgtccgtctgcagtcggcctatgccggagacaaagctgatgac
attcagaagagagaaggagaggttctggaggcctggaggaacctgctggaggcggcggag
ggccggcgggtgaagctggtggacaccggagacaagttccgcttcttcggcatggtgaga
gacctgatgctgtggatggaggacgtgacccggctcatcgaggcccaggagaagccgaga
gacgtgtcatcagtggagctgctgatgaacaaccatcagggcatcaaggcagagatcgat
gctcgaaacgacagcttcacttcctgcatcgagctggggaaagccctgctggcccggaaa
cactacgcttcagaggagattaaagaaaagttgttacagttgacggacaagaggaaagag
atgattgacaagtgggaggacagatgggagtggctccgcctggtcctggaggtgcaccag
ttctctcgggacgcaggcgtggccgaggcgtggctgctgggacaggagccctacctgtcc
agcagggagatcgggcagaacgtggacgaggtggagaagctcatcaagcgccatgaggcc
ttcgagaagtcggccgccacctgggaggagcgcttttcagcactggagaggctgaccacg
atggaactgctggaggtccgcagaaggcaggaggaagaggagaagaagagacaaccagat
gaggctcaggctgctgatgctgcagctcagagaagggagggtgaaccggtgtcccagaac
gggctgcagtctgagcaggagtctcccagggacgcagttgatgggggcgatgtggtcaac
ggggtgtcagagcccagtccctcggggtctcctggagcatctcgcaagagcaaacccagt
caggcagcaactctgccagctaaaacccaacaggatgcaccgacgtctcagctggaggcc
tttctgcaccgcaaacatgagtgggagggccacaacaagaaggcctcaaacagatcctgg
cacaacgtgtactgtgtgatcaacaaccaggagatgggtttctacaaggatcaaaagagc
gccagtcagggcattccttaccacagcgagatccccgtcagcctgaaggacgccgtgtgt
gaggtggctgtggattacaagaagaaacggcacgtcttcaagctcaaggtcactgatggg
aatgagtatctgttccaagccaaagatgatgaggagatgaacacctggatctcgaccatc
tctgccgctgttgcaggggttgagaagtcagaggtcacccccagcagccacagcacgccc
gcccccgctgctcgcgcccagacgctgccggcctccgtcgctacgacgactgctgcagag
tcaagccctggcaaacgagagaaagacaaggagaagcgcttcagtctgttcagcaagaag
aaataa
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integrated database retrieval system
