Nothobranchius furzeri (turquoise killifish): 107396509
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Entry
107396509 CDS
T05163
Symbol
jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107396509 (jmjd1c)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107396509 (jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
107396509
NCBI-ProteinID:
XP_015831752
UniProt:
A0A1A8AIU6
LinkDB
All DBs
Position
Unknown
AA seq
2809 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDKSPEIGDIARWPWRTGVIRAVSNRDSDTELTVYVEFDDQE
WEKREWVKVYEDFQLFLLEHQLVWAKRTEETAGGHLQGNKAKHIQWPALAFKPVVGKSLL
SPVTAVEFLLDRQLDFLSDHSSCQPYQDEVDSHNPVLRDYPQLHDEVKGWLKNQKVQEIF
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRSSQNNSAHTTGGRPSGTTGSSQSHYTRAQANSPRPVM
TSAGQNPKSSQGALAPQQQSQSQQIQQPFSQSHNSPLGNGREQREQRNTCSSRRKGSDSS
APEENKERRDEPSSRDSNLKVSKRRKDEADEKKAGLKRLKTDPTSDLSESSDSENPPKRT
TPSSCSSSSSSSSSSSSFSSSSEPNSENELKPSCIDVMQSSVSRTDEDEKAVVNGSKMTD
YSSLIGSMSPWEELAEVAEDLKKSTVKEPVQIIIKEEVELVALTQITQSPVEPVKPVLSE
ISQSGLLENKNLVKASTPSQTRSLIQIHGSAVIDITDDAQATVHWESSEAVSALLASQNA
ESTALSPYLPLNPSPISSPPVPPSPSPSEGGHRGEPEPLMKLSGVAGGRMTSPKSSGSKL
EFAPSELIRPIAAVAESVSLLEEKTILSHQQQQKHLQHYTSTPHGDNSPSSEQRWKHLQQ
PPPHKLNAAMPPDLTMPEKSPSPNRSSAQLDTVKQSSRPRSNSPSHPHPSTYAADHSMSE
PPPDLLDISKPKTNTCPEVSKHKVIRNPAPSPPPFTRLPSKADAAEPPRPGFESVPVRAE
TGGVCTSSSTNSPLIIDKKETFTVYRDPALVRSNPEAVVSSANSSNHVPAYLHPHLHSLH
PPSPHSPCLPPASHSHIAPHLLPPSHSPALPHPHILPHRMLPAIPPAAASLFGGHPRLDS
PGGLGHITLPHSATTHQQQFLQGPSSAAGLGLYPIIWQYPNGAPPSYPPGLNLQASSKWV
LSENPVAVNSEGPLRRNTASPWLHQSALSTGDGLGLLNHIPIRPASADTHRSSIKINANT
SPPMSKASMGIQKETLTLAQLRQNQMDQSCTSTEKDVHLHRLYLDSLIKPHRTNTQEALQ
AADRAVAYKEENRQILKESIEVAPYTAKIQPSTETGLNRDRERRHEQAFPVQMPALASAS
PKAIHTNPHMIQSERSSYYKTLSNNIANAPPRLFPSKECFGLGGSEETSGIGTIVGTAVQ
THGAQALTNYNTKCSLSKPPPLIKHQTDGGEGLAGKITEQLSQQVIQLHTSVDRKDHHDP
AVSLSLSSSSSLSPVSNHHHHPHQQQLRAMPSLYRAPVFHPPTQLALECKEAAEQEKEKE
WDKCCFVGRLSPPTLTPIQPMSLATSGTKTLVEQQKPPTLVPELRDVKGHEVTTAVTSMA
SNIIGEVKTDGWRGREMIWERESVLSRDKEVSKVKPQAAMASVIVRPITSLKHESPAGVN
KSSSINHQDFVSERLYPSKLHGEPPRCRENVREAGVGRVIQPNSNLDDMCTQYKNTSMQT
TPRPAGVTSTNPVCRSATVLSPGVDVQKEPPKAEHSARDELSAIKTGSEGWPLGHTRPAR
DYHHHEVFDARSASTGLSLLLASPAGRPLPNQIIIPAPSSSQAFSPSFVHLKKHKAALAA
AQSKSNLPPPPTSVPARNSSLALESADKAPNHSSTPPLYSSQASSSLTDDNSISAVSAAS
DKLSPLPNGQPSASAPVGCGQPSNYHKLKKAWLTRHSEEDRRTCATITMSNAKADKLLTT
TSSTCNATAMSDMIKPCTVNLSASTSSEVEMNKGEKEKQQEKNTGARGGEVKKSTPLSRR
GNKRLYDSGSESGGDDSDASESKMEGRAKRQPKPTYKKRQNDMARKRGDNEKEDEEVKPN
GIFRSAREKTKLKLATSNGIPRSVLKDWRKVRKLKQTGESFLQDDSCSEIGPNLQKCREC
RVVRSKKGEEPAHSPVFCRFYYFRRLSYSKNGVIRIDGFSTPEQFDEEALALWLPGSVEE
SQLDQNMAKYILTFIGDKFCQMVMTESTASSWIKKDAKLAWKRAVRGVREMCDACEATLF
NIHWVCQKCGFVVCLDCYKAKEKRSSKEKELYGWLKCVKGQLHDHKHLMPTQIIPGKVLM
ELVSSMHSLRDKYDIRSHCSCANKQNVLSKLPMTNSVSQVLQNVLNHSNKLSLVKAEPGS
EPNQSHGGVKTGTNGGGGNGESSPGTEVERVSVTPPESPSPLHFLADLAEQKSRQEKKEN
KEIALPGKSVKEEDGDSLEVLQQCKTTSLVTNSSEQGSTLRDLLTTTAGKLKLGSTDAGI
AFAPVYSTASQTEKRGRTMPNILDDIIASVVENKIPASRQNITAKLTIKQDHILPNNPPS
AIPEDIKLERKRLALPEDSIQYPDIPHCWLHNRKLLWLKDHCNHDNWKLFRECWRQGQPV
LVSGIHRRLSVSLWKADSFNQEFADHQGDLVSCRDQVVSNSGIKEFWDGFEDITKRPKSK
DGEPMVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYCDPEGNLNLASHLPSFFVRPDL
GPRLCCAYGVIASQDQDFGTANLHVEVSDVVSVLVYVGVAKGNGVLSKTGVLKRLEEEDL
DDGVRRRLKDSSETPGALWHIYLNRDMDKIREFLHKLCKEQSLDMSLDQDPIREHVWYLS
KKQRQRLLDEHGVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQVINDFVSPEHVCRSFH
LTQELRSNKEEVNYEDKLQVKNILYHCVKEAVSSLKRSASDKDVKEENS
NT seq
8430 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgaggctcggccggagctggtcgggaagcggttcctctgtgtcagcggagac
aagtcacctgaaatcggcgacatcgctcgttggccatggaggactggggtcatacgagcc
gtcagcaatcgcgacagcgacaccgagctgacggtgtatgtagagtttgacgaccaggag
tgggagaagcgagagtgggtgaaggtctatgaggatttccagctttttctcctggagcac
cagctggtctgggcaaagaggacggaagaaacagcaggaggccatctgcaggggaacaag
gccaaacacatacagtggcctgcactggcatttaagccagtggtggggaaaagcctgttg
tctcctgtaacagcagtggaattcttgttggatcgacagctggacttcctttctgaccat
tcgtcctgccaaccttaccaggatgaggtggacagtcataacccagtgttgagagactac
cctcagcttcatgacgaagtaaaaggctggctgaaaaaccagaaggtgcaggaaattttt
atgcaaggaccctactctttaaatggataccgtgtgcgtgtgtacagacaagactcggca
acccaatggtttactgggatcatcacacatcacgacctcttcagtcgaaacatggtcgtt
atgaatgaccaggtactggaacctcagaatgtggatccatctatggtacagatgaccttt
cttgatgacgttgtccactctctgctgaaaggggaaaacattggcatcacatccagacga
aggtcacgatccagccagaacaattctgcccatacgacaggagggagacccagcggaact
actggaagctctcagagccattacacccgagcccaggccaacagcccccgccccgtcatg
acctcagcagggcagaatcctaagagctcccaaggggcgctggcccctcagcagcagagc
cagtcacagcaaatccagcaaccattcagccagtcgcacaactcaccgttgggtaatggt
cgggagcagagagagcaacgcaacacttgctcttccagaaggaaagggtccgacagcagt
gctccagaggagaacaaggagaggagagacgagccttcgagtcgagattcaaatctgaag
gtgagcaaacggagaaaagatgaagcagatgagaaaaaggcaggtctgaagcggctgaag
actgacccaacatctgatctgtcagagagcagtgactcagaaaacccacccaaaaggacc
accccttcctcatgctcctcctcctcttcttcatcgtcatcttcctcctccttctcctcc
tcatcagagcctaactctgagaacgagctgaaacccagctgcattgatgtgatgcagagt
tccgtttccagaacagatgaggatgagaaggcagtggttaatggaagcaaaatgactgat
tattcatccctgattggttccatgtctccgtgggaggagcttgcagaagttgctgaagac
ctcaagaagagtacagtaaaggaaccagttcagattataattaaggaggaggtagaactg
gtggcacttactcagatcacccagtctccagtggagccagtgaaacccgtcctgtctgag
atctcccagagcggacttctagagaacaagaacctggtgaaagcatccactccctcccag
accagatctctcattcagattcacggcagtgccgtaatcgacatcacagacgatgctcag
gccactgtccactgggaaagctctgaggctgtgtcggcactgctcgcctcgcagaatgct
gagtcaactgccctctcaccctacctccctctcaacccttcccccatttcctcacctccc
gttcctccgtcgccctccccatcagagggaggtcacagaggggagcctgagcctctcatg
aagttgtcaggcgttgcgggaggcagaatgacatcgcccaagagttcaggcagcaagttg
gagtttgctccctctgagttgatcaggcccatcgcggcagtggctgaaagcgtatcgctg
ctggaagagaagaccattctttctcatcagcaacagcagaaacatctacagcattacaca
tctaccccccatggagataattcaccttcatcagaacagaggtggaaacatctgcagcag
ccccctcctcacaagttaaatgctgccatgccccctgacttgactatgcccgaaaagagc
cccagcccaaaccgcagctcggcccagctggatactgtgaagcagagttcccgacccagg
agcaactctccaagccacccccatccttccacttatgcagccgaccattcgatgtctgaa
cccccccctgacctgctggacatttctaaacccaagacaaacacttgtcctgaggtgtct
aaacataaagtaatcaggaacccagctccttctccacctccattcacccgtctgcccagt
aaagcggatgctgcagaacctccgcggcctggctttgagtcggtgccagtgcgggcggag
acgggtggagtctgtaccagcagcagcaccaatagtccactgatcattgataagaaagag
acttttactgtttacagagacccagcgctggtgcgctctaacccagaggctgttgtctcc
tcagctaattcatctaaccatgtgccagcctatctccatccccacctgcacagtctacac
cctccctcccctcactccccatgccttcctcctgcatcgcactctcacatagccccgcac
ctacttcccccatctcactccccagccttgcctcacccacatattttaccccacagaatg
ctgccggccattcctccggctgcagcatctctctttggggggcatcctcggctggactct
cccgggggactgggtcacattaccctccctcactcggcaaccacacaccagcagcagttc
ctccagggtcccagcagtgccgcaggacttggcctgtatcccatcatatggcagtaccct
aacggagcaccgccctcctaccctccaggactcaacctgcaggcttcttctaaatgggtt
ctttctgagaacccagttgctgtgaattctgagggtcctctacggaggaacactgccagc
ccatggctccatcagagtgcccttagcactggtgatggtctgggtttgttgaaccacatt
ccaattcgtccagccagtgccgacactcaccgatcttccatcaagatcaacgcaaacaca
agcccccccatgtcaaaggcttccatggggattcagaaagagactttgacattggcacag
ctgaggcagaatcagatggatcaaagttgcacctcgacagaaaaagatgtgcatcttcac
cgcttgtacctggattcgctcatcaaaccccaccggacaaacacccaggaagcacttcag
gcagctgatcgagccgttgcgtacaaagaggagaatcgtcaaatcctgaaagagagcatt
gaagttgcaccttacactgctaagatccagccctccactgagactggcctgaacagggac
cgagagaggagacacgagcaagcattccctgtacagatgccagctctagcctctgcaagt
ccaaaggccatccacactaatcctcacatgattcagtcagaaagaagcagctactacaaa
acgttgtccaacaacatcgctaacgcgcctccaagactcttcccgtccaaggagtgtttc
ggtctcggaggctcagaggaaacgtcgggaattgggaccattgttggtactgctgtgcaa
acacatggagctcaggctttgacaaattacaacaccaagtgttccctctccaagccccca
cctctgattaagcaccaaacggatggaggagagggtctagcagggaaaatcacagaacag
ctcagccagcaagtcatacaacttcacaccagtgtagacaggaaagatcatcacgaccct
gcagtttctctttccctctcctcgtcctcgtctttgtccccagtctccaaccaccatcat
cacccccatcagcagcagctccgggcaatgccttctctctaccgagctcctgttttccac
ccgcccacgcagctcgctctggaatgcaaagaggctgcagagcaggaaaaagaaaaggag
tgggacaaatgttgttttgtgggacggttgtcaccaccgactctcacgcccatccaacca
atgagtttagcaacatctggcaccaaaacgttagttgaacagcagaaaccaccaacgctg
gtgccagaactcagggatgtcaaaggtcatgaagtcactactgcagtcacctccatggcc
tccaacatcattggggaagtcaagacagatggatggagaggcagagagatgatctgggaa
agagaaagtgttctctccagagacaaagaggtgtcaaaggttaagccccaagcagcaatg
gcatcagtcatcgtgcggccaataacatctctgaagcacgagagtcctgctggtgtgaac
aaatctagttccattaatcaccaggactttgtttctgagaggctgtacccatccaagctt
catggggaaccacccagatgtagagagaatgtcagagaggctggagttggcagggttatc
caacccaactcaaacctggatgatatgtgcacccagtataagaacacatccatgcagact
acaccgaggcctgcaggtgtcacctctaccaatcctgtctgcaggtctgccacggttctc
tcaccaggtgtggatgtacagaaggaaccccctaaggcagaacactcggctcgggacgag
ttgtcagccattaaaactggctctgaaggctggccgcttggtcacacaagaccagctaga
gattaccatcaccatgaggtgtttgatgcacgttccgcttcaacgggactgtctttgctt
ttagctagtccagcaggaagaccgctacccaatcagatcatcatcccagcacccagctcc
agccaggctttctctccctcatttgttcatctcaaaaagcacaaagctgctttagctgca
gcccagtccaaaagcaacctccctcctcctcccacatctgtgccagccagaaactcttcc
ttagctttggagtcagctgacaaagctccaaatcacagctccactcctccactctattct
agccaagcttcctcgtccttgactgacgacaacagcatctctgcagtcagtgcagcatca
gacaagttaagccccttacctaatggccagccttcagcatcagccccggttggctgtggc
cagcccagtaactaccacaagctgaagaaggcctggttaaccaggcattctgaggaagac
aggagaacatgtgctaccatcaccatgtctaatgctaaagcagataaactgctcaccacc
acctccagtacatgcaacgccaccgccatgtcggacatgatcaaaccctgtaccgtcaac
ctcagtgcctccacttctagcgaggtggagatgaacaaaggtgagaaggagaaacagcag
gaaaagaacacaggggcccgcgggggggaggtaaagaagtcaactcctttatcaaggcgt
ggaaacaagcgcttatacgattctggctctgaaagtgggggagacgactcggatgctagc
gagagcaagatggagggtcgagctaaacgtcagcctaagccgacctacaagaaaaggcag
aacgacatggccaggaaaagaggagacaacgagaaggaagatgaggaagtgaagcccaac
gggatctttagatcagcccgagagaaaaccaaactcaaactggccaccagcaatggaatc
cctcgctcagtgctgaaggactggaggaaggtgagaaagctgaaacagactggggagtcc
ttcttgcaggatgactcatgttcagaaattggacccaacctgcagaaatgtcgggaatgc
cgagtggtccgcagcaaaaaaggcgaagagcctgcacattcccccgtcttctgtcgcttc
tactatttcagacggctctcatacagtaaaaacggagtcatccggatagacggattttcc
accccagagcagtttgatgaggaggccctggccctgtggctgcctggctctgtggaggaa
agccagctggaccaaaacatggccaaatacattctcactttcattggggacaagttctgt
cagatggtgatgactgaaagcaccgcttccagctggatcaagaaggacgccaagctagca
tggaagcgagcagtgaggggggtcagggagatgtgtgatgcatgtgaagcaacgctcttc
aacatccactgggtctgccagaaatgtgggtttgtggtctgcttggactgctacaaagca
aaagagaagagaagctcaaaagaaaaagaactatacggatggttgaagtgtgttaaagga
caacttcatgaccacaagcacctcatgccgacacagatcatccctggtaaagttctgatg
gagttggtgagctccatgcactccctgagagacaagtacgacatcagatctcattgttcc
tgcgccaacaaacagaatgtcctcagcaagctgccgatgaccaatagcgtctctcaggtt
ttgcagaatgtgctaaaccacagcaacaagctgtcactggtgaaggctgagccaggctcc
gagccgaaccagagccacggtggagtcaagacaggaaccaatggaggaggaggtaacgga
gaaagcagtcctggaactgaggtggaaagggtatcggtcaccccgccagagtctccgtct
cctctccacttcctggctgaccttgcagagcagaaatccagacaggaaaagaaagaaaac
aaagaaattgcactgccaggtaagtctgtgaaggaggaagatggggacagcctggaagtc
ctgcaacagtgtaagaccacctcactggtgaccaacagttcagagcagggctcaaccctc
cgagatctgctcaccaccacagcagggaagctcaagctgggatccactgacgcaggaatc
gcctttgctccagtctattctactgcttcacagactgaaaaacgcgggagaaccatgccg
aatatccttgatgacatcatcgcttcagtggtggagaataaaatcccagccagccgtcag
aacatcacagccaagctgacaatcaagcaagatcatatcctccctaataatcccccctca
gccatccctgaggacatcaaactagagaggaagaggttggcgctcccagaggactctatc
cagtatccagacattccccactgctggttacacaacaggaagttactgtggctcaaagat
cactgtaaccacgacaactggaagctgttcagagaatgctggagacaaggacagcccgtt
ttagtgtcggggatccataggcgactcagcgtcagtctgtggaaggcagactccttcaac
caggagtttgccgaccatcagggagaccttgtcagctgtagagaccaggtagtgtccaac
tctgggatcaaagaattctgggatggatttgaggacataaccaaacgaccaaagtccaaa
gatggagaacctatggtctacaggctgaaggactggccgtctggagaggagttcatggct
ctgatgccctccagatacgatgacctgatgaagaaccttccactgccagaatattgtgat
ccagaggggaacctcaacctggcctcccatctgccgtcattttttgtccgaccggacctt
ggaccaagactctgctgtgcatatggtgtcattgcatctcaggatcaggactttggaact
gccaacctccatgtggaagtctcggatgtagtctctgtcctggtctatgttggtgtagcc
aaagggaatggagtcctgtccaaaactggagtgctgaagcgtctggaggaagaggatcta
gatgatggagttagaagacgattgaaggactctagtgaaacaccaggggcgctgtggcac
atctacctcaacagggacatggacaaaatccgagagttcctgcataagctctgtaaggag
cagagtctggacatgtccttagaccaagacccaattagagaacacgtgtggtatctgagc
aagaagcagcgccagcggctactggatgagcatggagttcagggctggactgtggttcag
ttcctgggagattctgtcctgatacctgctggggccatgcaccaggtccagaatcttcac
agctgtgttcaagtcatcaatgactttgtgtctcctgagcacgtgtgcaggtcctttcac
ctgacccaggagcttcggtccaataaggaggaggtcaactatgaggataaattacaggtg
aagaacatcttgtaccactgtgtaaaggaggcagtgagctccctaaagaggagcgcttct
gacaaagacgtaaaagaggagaattcatga
DBGET
integrated database retrieval system
