Nothobranchius furzeri (turquoise killifish): 107396624
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Entry
107396624 CDS
T05163
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04136
Autophagy - other
nfu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107396624 (atg4b)
04136 Autophagy - other
107396624 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107396624 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107396624 (atg4b)
03029 Mitochondrial biogenesis [BR:
nfu03029
]
107396624 (atg4b)
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
107396624 (atg4b)
Membrane trafficking [BR:
nfu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107396624 (atg4b)
Mitochondrial biogenesis [BR:
nfu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107396624 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
107396624
NCBI-ProteinID:
XP_015831879
UniProt:
A0A1A8VDE1
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETPEPVWILGKEYSALTEKDEILSDVTTRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLGRDWRWAKGRKQREEYVSILNAFIDKKD
SYYSIHQIAQMGVGEGKPIGQWYGPNTVAQVLKKLAVFDTWSRLVVHVAMDNTVIIEEIK
RLCMPWLDLAGPCDQPAGAEELNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINEAY
IDTLKQCFMLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDGQVPDETY
HCQHPPCRMHICELDPSIAVGFFCRTEDEFDDWCMRIRRLTCKRGGLPMFELVDSQPAHM
VSIDALNLTPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactttgacgtacgacacacttcgttttggagagtttgaagattttccg
gagacgccggagccggtgtggatcttggggaaagagtacagtgcactgacagagaaagat
gagatcctgtcagatgtcaccacacgactgtggttcacatacagaaaaaacttccctccc
attggaggcactggaccaacgtcggacacgggatgggggtgcatgctacgatgtggacag
atgatcctgggagaggccttggtgtgcagacatttaggcagagactggagatgggccaaa
ggccggaaacaaagagaagagtacgtaagcattctcaacgccttcattgacaaaaaagac
agttattattccatccatcaaatcgcccaaatgggagttggcgagggcaagcctatcgga
cagtggtatggaccaaacacagtcgcccaggttctcaagaagctggcagtgtttgatacg
tggagcagattagtcgtacacgtggcaatggacaacactgtgatcatcgaggagatcaag
cgtctttgcatgccctggctagacctagcagggccatgtgatcaaccagcgggagccgag
gagctgaatggctgcctggaaggagcctgcgccctggctgaggaggagacagctctctgg
aaaccgctggtcctgctcatccccctcaggctgggcctgagtgatattaacgaggcctac
atcgacaccctgaagcaatgcttcatgctgcctcagtccttgggtgtgatcggaggaaaa
cccaacagtgcccattacttcatcggttacgtcggagaggagctgatctatttagaccca
cacaccacgcagcctgctgtggagccgtgtgaagacggtcaggttccagatgagacgtac
cattgtcagcacccaccctgccgcatgcacatatgtgaactggacccgtccatagcagtg
ggtttcttctgcagaacagaggacgagttcgatgactggtgcatgcgtataaggaggctg
acctgcaagagagggggcttgcccatgtttgaactagtagacagccaacctgcccacatg
gtcagcattgatgcacttaaccttactcctgatttctcagactctgacagactggagcgg
ttctttgattctgaagatgaggagtttgagatcctgtctctgtga
DBGET
integrated database retrieval system
