Nothobranchius furzeri (turquoise killifish): 107396649
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Entry
107396649 CDS
T05163
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107396649
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107396649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107396649
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107396649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
EGF
fn3_2
NDNF
Motif
Other DBs
NCBI-GeneID:
107396649
NCBI-ProteinID:
XP_015831938
LinkDB
All DBs
Position
Unknown
AA seq
1539 aa
AA seq
DB search
MISSPEERGEHLSQGLKGPHDQRLQSEGITMRTKEFLLSCITMALLLHLSLAGLINVIRH
KRDALMPKKTQENLTLPHPDQPVVFNHVYNINVPDTSLCSVDLDSPGGTKLKTESSAMDT
ANREHMEHTLDAENQIVFTHRINIPKQACRCDNQQPDLKHILNRLEMLESELSALREQCN
GGAACCGAQVTGEVSTRPYCNGRGNWSSETCSCSCEPGWKGPNCTEPECSNDCQDQGRCV
EGRCECFEGFVGDDCSIEVCLVDCGDYGQCVEGSCLCEDGFIGEDCSQTNCPNNCLGRGQ
CVEDECICDEPWTGFDCSELICPNDCYDRGRCVNGTCYCEEGFTGEDCGELSCPDGCNNQ
GMCVKGHCVCHSGYSGVDCSKLMCPKSCNERGHCFNGKCICDPGFGGEDCSILLCLDNCS
NRGQCINGECVCDIGYQGEDCSELSCLNNCQDQGRCVSGQCICDKGFTGEDCSTKTCPRD
CLGRGECLDGKCVCFVGFTGKDCAELTCPNDCLDQGHCVNGQCVCHKGFTGEDCSEKTCP
NNCLDRGHCIDGSCMCYEGFTGLDCSVIPCPGDCHNQGRCENGVCDCDEGFVGEDCSEVS
PPKDLTILEVTPETVDLSWQNEMRVTDYLITYAPTAPGGLELELLVPGNQKEATVRELEP
GVEYLISVFAVLNNKRSVPVSAKVAMHLPEAEGLKFKSVRETSVEVQWDPLDIPFDGWNL
IFRNTKEEDDEIFNSLGRPETTFEQSGLGPGQEYEVKLEVVKNKKRGPPAAKNVITRIDA
PSQVDVRDVTETTALVTWFQPVATVDGLSISFWPSLNPANRNVIELSSSDTQYHLGGLTP
DAQYEVSLTAKRGGQTSLPVNNSFITDLDAPRDLQTMELTDESITLEWKNSRAHVDQYRI
KYGPLSGGEHGELLIPRGPKDSTQAKITGLRPGTEYGMGVTAIKDERESIPATTNAVTAL
DSPKDLTVAEVTETSMTLEWKRPLAKLDTYKLVYVAADGHRVEDLIPASSETHTLRGLTP
GMLYTISMTAERGHRASRPATISAPTEIASPKGLRFSEVTDTSATFHWARPRTQADSYQV
TYVPAHGGTSKTLTLDGSESQTLLPNLTPGVTYQVTIVALEGRRESKPGSDSVTTALDKP
RGLTAANISDSEALLLWQPAIATVDGYVITYSADSGPPVMARVSGNVVEFEMSSLTPATH
YTVKVYAVRELAKSAATTTEFTTDVDAPVDLTTSNIQTENALLTWKPPRADITGYILSFQ
SAGGTIREVVLSPTAGSYNMAQLSASTEYSVQLQALAGPKRSRVISTVFTTTGVLYRYPR
DCSQALLNGDTSSGLYTIYLGGDDNQPLQVYCDMSSDGGGWIVFLRRQSGRLEFFRNWKN
YTAGFGDMNDEFWLGLSNLHKISSGGQYELRVDLRDKGETAYAQYDKFSVSEPRTRYKVH
VGGYSGTAGDSMTYHHGRPFSTYDHDNDIAVTNCALSYKGAFWYKNCHRVNLMGRYGDNS
HSKGVNWFHWKGHEHSIEFAEMKIRPSNFRNLEGRRKRS
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgatttcctcaccagaggagaggggcgagcatttatcacaaggactgaaaggaccgcat
gatcagaggctgcagagtgaagggatcaccatgaggaccaaagaattcctcctgagctgc
attaccatggctctactgctccatctctccctggctggtctgatcaatgtcattcgccat
aaaagagacgccctgatgcccaagaaaacccaggagaacctcactctgccacatcctgac
cagccagtggtgtttaatcatgtctacaacatcaacgttcccgacacgtcgctgtgctcc
gtggaccttgactcaccgggtggaactaagctcaaaacggagagttctgcaatggatacg
gcaaacagagagcacatggagcatacgctggatgcagaaaatcagatcgttttcactcat
cgtatcaacatccccaaacaagcatgccgctgtgacaaccagcagccagacctgaagcac
atcctaaaccgactggagatgttagagtcagaactttctgctttaagagagcagtgcaac
ggtggagccgcctgctgtggagctcaggttacaggggaagtgtctacaaggccctactgt
aatggacgtggaaactggagtagtgagacctgcagctgctcatgtgaaccaggatggaaa
ggccccaactgcacagaacctgagtgctccaatgactgtcaggaccagggtcgatgcgtg
gagggcaggtgtgaatgtttcgagggctttgttggggatgactgtagtattgaggtctgc
ttagtggactgtggtgactacggtcaatgtgttgaagggtcttgtctctgtgaggatggc
ttcattggtgaggactgttcccagaccaactgcccaaacaactgtcttggtcgaggacaa
tgtgtggaagatgagtgtatttgtgatgagccatggacaggatttgactgctctgagctc
atctgtcctaacgactgctatgaccgagggcgctgtgttaatggtacctgctactgtgaa
gaaggctttactggagaagactgtggtgagctcagctgccctgacggctgtaataaccaa
ggcatgtgtgtgaaaggccattgtgtgtgtcacagtggttacagtggagtggactgctcc
aagctcatgtgccccaaaagttgcaatgagagaggtcattgcttcaatgggaaatgcatc
tgtgaccctgggtttggaggtgaagactgctcaatcctcttgtgccttgacaactgcagc
aacaggggtcagtgcattaatggagagtgtgtgtgtgacataggataccaaggtgaagat
tgcagtgagctttcctgtcttaacaattgccaagaccagggccgctgtgtcagtggacag
tgcatatgtgacaaaggattcactggagaagactgcagtaccaagacctgccctagagac
tgcttaggaagaggagagtgtctggatggaaagtgtgtgtgctttgtgggcttcacagga
aaagactgtgccgagcttacctgtcccaatgactgcctggatcagggtcactgtgtcaat
ggccaatgtgtttgtcataaaggtttcaccggagaggactgcagtgagaagacatgtccc
aacaactgtctggacagaggccattgtattgatggcagctgcatgtgttacgagggtttt
acagggctggattgctccgttataccctgcccaggagactgccataaccaggggcgctgt
gagaatggagtgtgtgactgtgacgagggcttcgtaggggaggactgctctgaggtttca
ccacccaaggaccttacaatactagaggttaccccagaaactgtggacctgtcatggcag
aacgaaatgcgtgtgacagactacctgatcacctatgcacccacggctcctggaggtttg
gagcttgagcttcttgtacctggcaaccagaaggaagccactgttcgggaacttgaacct
ggtgtggagtacctgatcagtgtctttgctgttttaaacaacaagaggagtgttcctgtt
agtgctaaagtggcaatgcatcttcctgaggctgaaggtctaaagtttaaatcagtgcga
gaaacttcagtggaagtgcaatgggacccactggacattccttttgatggctggaatctc
atcttcagaaacacgaaagaggaagacgatgagattttcaactccctcggccgcccagaa
actacttttgagcagtcaggcctgggtccaggccaggagtatgaggtcaaactggaggtg
gtgaagaacaaaaagcgtggaccacctgctgccaagaatgtcatcacaaggattgatgcc
cccagccaggtggatgtgcgtgacgtgactgaaaccacagcattggtgacttggttccag
cctgtggccactgtggatggtctcagcatttccttctggcccagtttaaacccagctaat
cgaaatgtgattgaattgtcctccagtgacacccagtaccacctgggaggcctcactcct
gatgcccagtacgaggtgtctctgacagcaaagagaggaggtcaaaccagcttaccagtg
aataactccttcataacagatctggatgctcccagagaccttcagaccatggaactaaca
gatgagagcatcacactagaatggaagaacagtcgggctcatgtggaccagtaccgcatc
aagtatggcccactgtctggaggcgaacatggagaattgctcatccctcgcggacccaaa
gactccacccaggctaagatcactggcctgagaccaggaactgagtatggaatgggcgtg
acagccataaaagatgaacgggagagtatccctgccactaccaatgcagttacagctctg
gattctcctaaagacctgactgtggctgaggtgaccgagacctccatgacgctggagtgg
aaacgccccctggctaaactggacacctacaaactagtctatgttgctgctgacggccac
agggttgaagacctgattccagccagctctgaaacccacacactcagaggcctgactcct
ggcatgctgtatactatcagcatgactgcagagagaggccacagagccagccgacctgcc
accatctcagcacccacagaaattgcctcaccgaagggcctccgcttctcggaggtgact
gacacgtctgccacttttcactgggcacgaccgagaactcaggcagacagttaccaggtc
acctacgtccccgcccacggaggtacttctaaaactctgacattggatggttctgagtct
cagacactgctgcccaacctcacaccgggggtcacctaccaggttaccattgttgctctt
gaaggccgaagggaaagtaagcctggatcggacagcgttaccacagctctggataagccc
cgtggtttgacagcagccaacatctcagactccgaggccttgctgctatggcagcctgcc
attgccactgtggacggttatgtcatcacatacagtgcagattctggtcctccagtgatg
gcgcgtgtgtctggaaatgtggtggagtttgagatgagctctctgacgccggcgactcac
tacacagtgaaggtctatgctgtgagggagctggctaagagtgcagccactacaacagag
ttcactacagatgttgacgcccctgtggacctcacaaccagtaacatccagactgagaat
gccttactcacttggaagcctccccgggctgacatcactgggtacatcctcagcttccag
tcagctggcggcaccatccgggaagtggtgctgagtcccactgctggatcatacaatatg
gcccagctgagtgcttctaccgagtattcagtccagctgcaggccctcgctggtcccaag
agaagcagagtcattagtactgtcttcaccaccactggcgttctgtaccggtaccctcgg
gactgctcccaggccctgctcaatggggacacctcgtcaggcctgtacaccatctacctg
ggtggagatgacaaccagcccctgcaggtttactgcgacatgagcagcgacggaggtggc
tggattgttttcctcagacgccagagtggcagactggagttcttccgcaactggaaaaac
tacacagctggttttggggacatgaatgatgaattttggcttggtttgtccaacctgcac
aagatctcgtctggaggacagtatgagctgcgggtcgacctgagagataagggagagact
gcctatgcccaatatgacaagttctctgtgtctgaaccacgaacccggtacaaagtccat
gtgggaggatacagcgggacagcaggtgactctatgacgtaccaccatggacgtcccttt
tccacttatgatcatgacaacgacatagctgtcaccaactgtgctctgtcctacaaggga
gccttctggtacaagaattgccaccgagtaaacttgatgggacgatatggagacaacagt
cacagcaagggtgtcaactggtttcactggaaaggacacgagcactccattgagtttgcc
gagatgaagatccgtccatctaacttcagaaacctggagggacgaaggaaacgatcttaa
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integrated database retrieval system
