Nothobranchius furzeri (turquoise killifish): 107396804
Help
Entry
107396804 CDS
T05163
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107396804
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
107396804
Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107396804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
107396804
NCBI-ProteinID:
XP_015832135
UniProt:
A0A8C6PJZ7
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSSYTVTLPGPGPWGFRLQGGKDFNMPLTISRITPGSKAAHGNLIQGDVIVAIDGLSTEG
MTHLEAQNRIKMANHNLALSMSKSKRPMPRMDAAIPVIPHQQVFSPAAPNAGFNPSMLMD
SALTTHKPIEVKGPGGKATIIHAQYNTPISMYSQDSIMDTIAGQSQAKGHDPSPVPGKDR
LVDSASPVYQAVQEAEKDQEVVEWGRRSTSSQSKSFQILAHMTQSESSLLQQKEEEMRRS
SQYGLHPPMHQAPPMHQAPPMHQAPPMHQAPPMHQVPPMHQIPPMHQAPPMHQAPPPQPY
QQIPPQYQQSPTHQAPPTQQSSIQIPLGSGPPKVVSTACIYPTQPGPAPGSAPVLAQPQP
HPPISAPAPPIGGPSSSNRPPWVTDTNFADKFDPGKTTTTSMKVQPLPQAAPPPPTYIPN
PSSAVPAPSTPNPTPIPSSPAPFPPVARGVAQRAERFAASSRTPLCGACNSIIRGPFLVA
LGRSWHPEEFNCHYCHVSLADVSFVEEQNNVYCENCYEEFFAPTCARCNTKIMGEVMHAL
RQTWHTTCFVCAACGKAFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEA
LGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctacactgtgaccctgccaggccctgggccctggggcttcaggctgcagggg
gggaaggacttcaacatgccgctgaccatctccaggatcacgccaggcagcaaggcggcc
cacggtaacctgatccagggtgatgtcattgtcgccatcgacggcctcagcacggagggc
atgacacacctggaggcccagaacagaatcaagatggccaatcacaacttggctctctcc
atgtccaagtccaagcgtcccatgccgagaatggatgctgccattcccgtgattccacac
cagcaggtcttctccccagctgctcccaacgccggcttcaaccccagcatgctgatggac
tccgccctcaccacccataaacccatagaggtgaaaggtcccggtgggaaggccaccatc
atccacgcgcagtacaacacccccatcagcatgtactcacaggactcaattatggacacc
atcgcgggccagtctcaggccaaaggtcatgaccccagtccagttccaggtaaagaccgg
ctggtggacagcgcctctccagtctaccaggctgtccaggaggcagagaaggaccaggaa
gtggtggagtggggccgccgcagcaccagctctcagtcaaagtccttccagatcctggcc
cacatgacccagagcgagtcctctcttctgcagcagaaagaggaggagatgaggaggagc
agccagtacggactacatccgcccatgcaccaggctccacccatgcaccaggctccaccc
atgcaccaggctccgcccatgcaccaggctccacccatgcaccaggtcccgcccatgcac
cagatcccgcccatgcaccaggctccacccatgcaccaggctccaccaccacaaccctat
cagcaaattccacctcagtaccaacagtcacccacacatcaagccccacccactcagcag
agttccatccagattccacttggttctggacccccgaaggttgtaagcaccgcctgcatc
taccccacccaaccaggtccagctcctggctcagctccagtcctggcccagccccagccc
cacccccctatctctgctccagctccacccataggtggtccctcctcttccaacagaccc
ccctgggtaactgacacaaattttgctgataaatttgaccccggtaagaccaccaccacc
tccatgaaagtgcagccactgccccaagcagcccctcccccaccaacatacatccccaac
ccctcctccgcagtcccagccccatccactccaaaccccaccccaataccatccagccct
gcacctttccctcctgtggctaggggtgtggctcaaagggcagagagattcgccgccagc
agccgcacaccgctgtgtggtgcgtgcaacagcatcatcaggggccccttcctggtggcc
ctcggtcgctcctggcaccccgaggagttcaactgccactactgccatgtttctctggcg
gatgtcagctttgtggaggagcagaataatgtttactgtgagaactgctatgaggagttc
tttgctccaacctgcgctcgctgcaacaccaagatcatgggggaagtgatgcacgcccta
cgacagacgtggcacaccacctgcttcgtgtgtgcagcctgtggtaaagcctttgggaac
agtctcttccacatggaggacggggagccgtactgtgagaaagactacatcgctctcttc
agcaccaagtgtcacggctgcgacttcccggtggaagctggagataagttcatcgaggct
ctgggtcacacctggcatgatacctgcttcgtgtgcgcggtctgtcacgtgaacctggag
ggtcagccgttctactccaagaaggacaaacctctgtgcaagaagcacgctcacgccatc
aacgtgtag
DBGET
integrated database retrieval system
