Nothobranchius furzeri (turquoise killifish): 107396939
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Entry
107396939 CDS
T05163
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107396939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107396939
03021 Transcription machinery [BR:
nfu03021
]
107396939
03036 Chromosome and associated proteins [BR:
nfu03036
]
107396939
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Helix-turn-helix
ARID
107396939
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107396939
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107396939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
107396939
NCBI-ProteinID:
XP_015832277
UniProt:
A0A1A7ZNB9
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MAAQVATLNTSPPPELKKPDRDIQEESVPGEKQHENKETGHDVGSPGLKELQDGSDAGNA
GGGGDPDMKNSNGNLPRVNNNSSNQNDTGGPEGNNLPGMGHHQGPFPPPPYGYNQPYSRG
SFPQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYHNNYNNYTPFQNRTSYQGQGYGPMNS
PRNSQPPAAGGQPGKQQPGGGTTAMAASYNNHRYNMGNQQPTSTPTLNQLLTSPSSTKSY
PNYPQGDYNNQEGANKGPGDMGSSQYGGVHPSWQQRTHHPPPMSPGNTGQPPSRNQTPNP
MDQVGKMRSQPYGGPNPYSQHQHGPPSGPGPQQGSSYPGQGFGPPGPQRYPMGMQSRTPG
SMSGMQYGQQMSTYGQQGPGGYCQQNPSYYSQHGPPQPPYPGQSQGSSGPPYSQQSHPSQ
PPGQHGQPGAAYQQSQGPHSSAPGQPPYNQSSQSQPGQTPYVPTQQQQPQQQQQQGPAPQ
SEPGSQGQAGYPQPPGAGQPPQQQTPQQQRGPLNQQQQNQAGGPPPPAQQPTGHGQQSQS
PYSQTPPLQQQQPPQQQQSPYQRFPPPPQELSQDSFSSQSSAPSNQTSKSGQEDSMQARP
SSLPDLSGSIDDLPTGTEAALSPGISTSGVSSSQGEQSNPAQSPFSPHTPPHLPGIRGPS
PSPVGSPASVTPSRTGPLSPAAVPGSQMPPRPPSVHSDGIMHSSMNQDRVYMRNPQMPPY
GSPGQPGSALSPRQPSGGQMHGGMGSYPQNNTMGNYGPQGGQYGPQGYSRQPGYTGMPNA
NYSSGPGMGGSMNPMSGQGGGAPYGNMPPGRIGPGQMGARPYGPGMGSNMAGMPPQVGSG
MCPPPGMNRKEGGPPMHHGPTNSIHNRPPGYPSMPQGMMGAGSPYGPGMNSMHGVMNQGG
PGSYPMGGNMTNSSPGMTPSSEFGMDKMNPTQKINNKVEGTPKPESKKKSSSSTITNEKI
TRLYELGPEPERKMWVDRYLAFAEEKAMGMNNLPAVGRKPLDLFRLYVSVKEIGGLTQVN
KNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDFFNTDTKKNQTK
IQPPSPAGSGSLQGPQTPQSTTSSMAEGGDLKPPTPASTPHSQMPPMPGVRSSVNLQDPF
ADGGDPVFSRRNAMTPNSQGYQPGMSGPEIMGRMGPYESNKDPFGGMRKAGEQFMPPGPN
SGMGEQYNRGPPGPMGNIPMGQRQQYPYGFDRRQEQGMGPDGNMGPGAPQPNMMPSGADA
GMYSPSRPPPQQRHEAYTNQYPGQGAPPGGPYPNQQPGMFQQQQPNYKRPVDGGYGPPAK
RHEGEMYNVPYSGQQQPGPQPSGHQGQQDMYNQYNPYPGGDRRPPGPQSQFPFPFGRDRG
PSSAGPNSQSHMPPQIMGSPMPSGPDGPQGPVWQGRNEMGYLNYSNRQGPPVPGQGPGYH
SMNRSDEMIPSDQRMNHEGQWPGHVNQRQPPFGPAGSGPPMTRPLPSTYQTSQNHIPQVS
SPAPMPRPVESRTSPSKSPYMHPGIKVQKAGPPVPASHIGQAPVQQPLIRRDVAFPPGSV
EASQPHLKPRRRLTMKEIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNL
CQLPGFLEMVVEYFRRCLIEIFGILKEYEVGDPGQRILLDPNAADDSDDDVLLPEGEDMH
TDEEDEEDEETEETKTSPDASLLVHVKEEEEETFLKAKSSEDEEDEKESSAKEASTSTSG
SLQDPNVHLEKPKQASKFDKLPIKMVRKKNPFLGNGFSRLGQRQSFNSGLIHWSIGGGDT
TDHIQTHFESRMDLLQQRKCMTAATEGHKKNKVPGTTVEKPKKSKCCEEEMAREQHVQIS
EPTKEPAEKTPPSLPIGAPVTATIDDVLSARPGSVTEEVVRGGAEEQKENGKYLFSINPD
LQSRRNIKILEDEPHSKDETPLSTLLDWQDSLARRCICISNIVRSLSFVPGNDLEMSKHP
SLLLLLGRLVLLHHRHPERKQAPVTYEKEEEEDDGVSCGRDEWWWDCLEVLRENCLVTLA
NISGQLDLSIYSESICLPLLDGLLHWAVCPSAEALDPFPTLGPHSSLSPQRLVLETLSKL
SIQDNNVDLILATPPFSRLEKLYGSLVRLVGERKIAVCREMAVVLLANLAQGDSLAARAI
AVQKGSVGNLLGFLEDSLAATQYQQSQSSLLQMQGGPQFEPTSVDMMRRAARALHALAKV
EENHLEFTLYESRLLDISVSPLMNPLVSQVICDVLFLIGQS
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccactctcaacactagcccgccacccgaactcaaaaagccggat
cgggacattcaagaggagtcggtaccgggagagaagcaacatgaaaataaggaaacggga
catgacgtgggatctccgggcctgaaggagctgcaggacgggagcgatgctgggaacgcc
gggggaggaggggatcctgacatgaagaacagcaacgggaatctgcccagggtaaataac
aacagcagcaatcagaatgatacaggcggacccgaagggaacaaccttcccggaatgggc
caccaccagggcccctttcctccacctccatacggctacaatcagccctatagccggggc
tcttttcctcaacatggcggacaacaaagccctggcatggcagctgcatcggggccaggc
atgatggacccttacccccccaattcacacgaacacggctatcacaataactacaacaac
tacacccccttccagaacaggacttcttaccagggccaaggatacgggcccatgaattcc
ccgcgtaacagccagcctccggcggctggggggcagccaggcaagcagcagccaggagga
ggaaccaccgctatggctgcctcttacaataatcacaggtataacatgggaaatcaacag
cctacgtctacaccaactttaaatcagcttttgacatctcccagctctactaagagttac
ccgaactacccccaaggagactataacaatcaggaaggggccaacaagggaccaggggac
atgggcagcagtcagtatggtggggttcacccgagttggcaacaaaggacccaccatcca
cctcccatgagcccgggaaacaccggacaaccacccagcaggaatcagactccaaacccc
atggatcaggtagggaagatgcgtagccagccatatggaggacccaacccttattcccag
catcagcatgggcctccatctggtcctggtccccaacaaggaagttcttaccctggacaa
ggctttgggcctccaggcccccagagatacccaatggggatgcagagccgcacaccaggc
tctatgagtggcatgcagtacggacagcagatgtccacttatggacagcaaggtccagga
ggctactgccagcagaatccgagctactacagtcagcatggcccaccgcaacctccatat
cctggtcagtcccaaggcagctctggccctccctactcccagcagagtcatccatctcaa
cctcctggccaacatggccagcctggggctgcttatcaacagtctcaagggccacacagt
tctgctccaggccagcctccttacaaccagtcctcacaatctcagccaggacagacacct
tatgtccctacccagcagcagcagcctcaacaacagcaacagcagggccctgctccccaa
agtgagccgggctctcagggccaagctggatacccacagccacctggagcaggtcagcca
cctcaacagcaaactccacagcagcagcgaggacccctgaaccaacagcagcagaatcaa
gcaggaggtccacctcctccagcccagcaacccacaggtcatggacagcaaagtcaatca
ccttactcccagacaccccctctgcaacagcagcaaccaccacagcagcagcagtcacca
tatcagaggttcccgcctcctccacaggaactctcccaggattccttcagctctcagtcc
agtgctccttcaaaccaaaccagcaagagcggtcaggaagacagcatgcaggctcgacca
tccagtctgccggatctctcgggctccatcgatgacctgcccactggcacagaagccgcc
ttgagtccgggcatcagcacctccggggtgtccagcagccagggcgagcagagcaaccca
gcccagtcccccttctccccacacaccccgccacatctgccaggcatacgcgggccctcg
ccttcacccgtgggttcccctgctagcgtcaccccatctcgcactggcccactgtccccc
gctgctgtgccaggtagtcagatgccaccccggccgcccagcgtccattcagacggcatc
atgcattcttctatgaaccaggacagggtgtacatgagaaaccctcagatgcctccatac
gggtcccctggacagcctggctctgctttatctccacgccagccttcgggaggccagatg
catggtgggatgggatcttatccccagaacaacaccatgggaaactacggtcctcagggg
ggccagtatggcccacaaggttattccaggcagcctggttacacggggatgcccaacgcc
aactattccagtggtccagggatgggtggctctatgaaccccatgtcaggtcagggaggc
ggcgctccgtatggaaacatgcctcctgggaggataggtcctggacagatgggcgcacgg
ccctacggtcctggcatgggctccaacatggctggcatgcctccccaggtggggtccggg
atgtgtccccctccaggcatgaacaggaaggagggtggcccccccatgcatcacggtccc
actaactctatacacaacagaccgccgggctacccaagcatgccccagggcatgatggga
gcaggctctccatacggcccaggcatgaatagcatgcacggtgtgatgaatcagggaggg
ccagggtcttatccaatgggtggaaacatgaccaacagctccccaggaatgactcctagc
tctgagtttggtatggacaaaatgaaccccacccaaaagatcaacaacaaagtcgagggg
actccaaagcctgaatccaaaaagaagtcgagttcttccactatcactaatgaaaagatc
actcggctgtatgagctcggtcctgagcctgagaggaagatgtgggtggaccggtacctg
gcttttgccgaggaaaaggccatgggcatgaacaatcttcctgctgtcggccgtaagcct
ctcgatctcttcagactctatgtgtccgtcaaagagattggtggtctcacccaggtgaac
aaaaacaaaaagtggagggagctggccactaacctgaatgtgggcacgtcgagcagcgcg
gcgagctcgctaaagaaacagtacatccagtgtttgtatgccttcgagtgcaagatcgaa
cgtggtgaagacccacctccggactttttcaacacggatacaaaaaagaaccaaacgaag
atccagcctccgagcccagctggttcagggtccctccaaggaccccaaaccccacagtcc
actactagctcaatggcagaagggggagacctgaaaccccccaccccagcgtccactccc
cactcacaaatgcctccaatgcccggcgtcagaagtagtgttaatcttcaagaccccttt
gctgatggcggagacccagtattttccaggaggaatgccatgactcccaactctcagggc
taccagcctgggatgagtggtccagagattatgggccgaatgggtccttacgagtcaaat
aaggacccctttggaggcatgaggaaagctggagaacagttcatgccacctggccccaac
agcggaatgggtgagcagtacaacagaggaccacctgggccgatgggcaacattcccatg
ggccagaggcaacagtacccgtatggatttgatcgaagacaagaacaaggcatgggccct
gatggcaacatggggcctggagcacctcagcccaacatgatgccttctggtgcagatgca
gggatgtattcacccagccgtcctccaccacagcagcggcatgaggcctatacaaatcaa
tatcctggtcaaggagcgccccctggtggcccatacccaaatcaacagccaggaatgttc
caacagcagcagccgaactataaacgtccggtagatggagggtatggacctccagccaag
cgtcatgagggagagatgtacaacgttccttacagtggtcagcaacagcctggaccccag
ccctctgggcaccagggccagcaggacatgtataaccagtataatccatatccaggtgga
gatcgcagaccacctggcccacagagccagtttcccttcccatttggacgggacagagga
ccatcatctgcaggtccaaactcccaatcccacatgcctccccagataatgggaagccca
atgccttcaggtcctgatggaccccaaggcccggtgtggcagggtcgaaatgagatgggc
tatctcaactattccaacagacagggaccacctgtaccaggccagggacctgggtaccac
agcatgaaccgttcagacgagatgataccatcagaccaacgcatgaaccatgagggacag
tggcctggtcacgttaaccagcggcagccaccgtttggccctgcaggctctggaccacca
atgacaagaccccttccttccacctaccaaacttcccagaaccacattcctcaggtgtca
agcccagcgcctatgcccaggccagtggagagcaggacgtcacccagcaagtctccctac
atgcatccgggcatcaaggtgcagaaagcaggtcctccagtgcccgcctcgcatattggt
caggcacctgtgcaacaacccttgattcgacgagatgtggcctttcctcctggctctgtg
gaggcttcccaaccgcacctcaaaccccgaagacggctcaccatgaaagaaatcggcact
cctgaagcgtggagagtgatgatgtcactgaagtcgggtttattagctgaaagcacctgg
gccctggacaccattaacattctactgtacgacgacaacagcatctctacgtttaaccta
tgccagctacctggattcttggaaatggttgtggagtacttcagacgttgcctcattgag
atctttggcattttaaaggaatacgaagtaggagatcctggccagcgtatcctattagac
cccaatgcagcagacgactctgacgatgatgtcctccttcctgagggcgaagacatgcac
acagatgaggaggatgaggaagatgaggagacagaggaaacaaaaaccagtcctgacgct
tccttgctggtgcatgtgaaagaggaggaggaggaaacctttctgaaagctaagtcctca
gaggatgaagaagatgaaaaggagtcttctgccaaggaagccagtacttctacctcaggg
tcccttcaggaccccaatgttcacttggaaaagcctaagcaggctagcaagtttgataag
ctgcccataaagatggtgcgaaagaagaatcccttcctgggtaacggtttttccagactt
gggcagcgacaaagcttcaacagtggcctcatacactggagcattggaggtggtgacact
actgaccacatccagacccactttgagagtcggatggatcttcttcagcagagaaaatgc
atgacagcagccaccgaaggccacaagaagaacaaggtgcctggtaccacagtggagaag
cctaaaaagtccaagtgctgtgaagaggagatggctcgggagcagcatgttcagatttct
gaacccaccaaggaaccagcagagaagacccccccttctcttccaattggtgcaccagtc
acggccaccatcgatgacgtgctatctgctcggccagggtccgtcacagaggaggtggtc
cgtggaggtgctgaggagcagaaggagaatggcaagtacctgttcagcatcaaccctgac
ctacagagccgccgcaacatcaaaatcctggaagacgagccacacagcaaggacgaaacg
ccgctcagcaccctgttggactggcaggactcgctggctcggcgctgcatctgcatctcc
aacatcgtccgaagcctctcctttgtgcctggcaacgacttggagatgtcgaaacacccg
agcctcttgttgctgttgggccgtctggtgctgctccaccacaggcaccccgaacgcaaa
caggcccccgtgacctatgagaaggaggaagaggaggatgatggtgtgagctgtggcagg
gacgagtggtggtgggactgcctcgaggtgttacgggagaactgtttggtcactctggca
aacatctcaggccagttggacctttccatctactctgagagcatatgcctcccgctgctg
gatggtctgctccactgggctgtttgcccttcagcagaggccttggatcccttccctacg
ctcgggccccacagctccctttcaccccagagactggtcctcgagaccctcagcaagctc
agcatccaggacaacaacgttgacctcattctggcaacaccaccattcagccgcttggag
aagctctacggctcgctcgtacgtctcgtcggtgagcggaagatcgctgtctgccgggaa
atggcagttgtcttgctagcgaacttagctcagggtgacagcctggcagctcgggctatt
gctgtgcagaaaggcagcgtgggtaacctgctggggttcctagaggatagcctagcagcc
acgcagtaccaacaaagccaaagctccctgctccagatgcagggtggcccacagtttgag
ccaaccagcgtggacatgatgcgacgagcggcccgggcgctgcatgccttggccaaggtg
gaggaaaaccacttggagttcactttgtacgagtcacggctacttgatatctcagtgtcc
ccacttatgaaccctctggtgtcccaggtaatctgtgatgtactgttcctgattggccag
tcgtga
DBGET
integrated database retrieval system
