Nothobranchius furzeri (turquoise killifish): 107397144
Help
Entry
107397144 CDS
T05163
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03082
ATP-dependent chromatin remodeling
nfu03083
Polycomb repressive complex
nfu04110
Cell cycle
nfu04330
Notch signaling pathway
nfu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107397144
03083 Polycomb repressive complex
107397144
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107397144
04350 TGF-beta signaling pathway
107397144
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107397144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107397144
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107397144
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
107397144
HDAC complexes
Sin3A-HDAC complex
107397144
BRAF-HDAC complex
107397144
REST complex
107397144
SHIP complex
107397144
MiDAC complex
107397144
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107397144
Heterochromatin formation proteins
Other heterochromatin formation proteins
107397144
Chromatin remodeling factors
NuRD complex
107397144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Glypican
Motif
Other DBs
NCBI-GeneID:
107397144
NCBI-ProteinID:
XP_015832542
UniProt:
A0A1A8VBY9
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNVTIKGHAKCVEYIKGFNLPLLMLGG
GGYTIRNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTTEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGDEDEEDPDKRISIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKVKRVKKEEEKEGEEKKEVKEEDKEEEKMDTSGPKEEMK
TS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattactacgacggtgatgtggga
aactactactatggccaaggtcaccccatgaagccccacaggattcgcatgacacacaac
ctcctgctaaactacggactgtacaggaaaatggaaatctatcgaccacacaaggccagc
gccgaggagatgacaaagtaccacagcgacgactacattaagttcctgaggtccattcgc
ccagacaacatgtctgagtacagcaaacagatgcagagatttaatgtcggggaggactgt
ccggtgttcgacggtttgtttgagttctgccagctctcaacaggcggttctgtggcggga
gccgtgaagctgaacaagcagcagacggacatcgccatcaactgggctggtggactccat
cacgccaagaagtccgaggcgtctggtttctgctacgtcaacgacatcgtcctggccatc
ctggaactgctcaaatatcatcagagagtgttatacatagacatcgacatccaccacggt
gatggagtggaggaggctttttacaccacagacagggtcatgaccgtctcgttccataag
tatggagagtacttccctggtactggagacctgagggacattggagcaggaaaggggaag
tactatgctgtaaactacccacttcgggatggcattgatgacgagtcgtatgaagccatc
ttcaagcctatcatggctaaagtgatggagatgtaccagcctagtgcggtggttctgcag
tgcggcgcagactccctctcaggtgaccgtctgggctgcttcaacgtcaccatcaaaggc
cacgcaaagtgtgtcgagtacattaaaggtttcaacctccctctgctgatgctcggtgga
ggaggatacaccattcgcaacgtggcccgctgctggacctacgaaactgctgtcgccctg
gactcctccatccccaacgagctgccctacaacgattactttgagtactttgggcccgac
tttaagttgcacatcagcccgtccaacatgaccaaccagaacaccactgagtacctggag
aaaatcaaacagcgtctgtttgaaaaccttcgcatgctcccacatgcacctggtgtgcag
atgcaagccatccctgaggatgcgcctcacccagacagcggagatgaggatgaggaggac
cccgacaagcgaatctccattcgggcacatgacaagaggatagcctgcgaggaggaattt
tcagactctgaggatgaagcagagggtcaggggggaggtcgcaggaatgcagccaaccac
aaaaaggtcaaaagagtgaaaaaggaagaagagaaagaaggagaggagaagaaagaagtg
aaagaggaagacaaagaagaagagaagatggatacatcaggaccaaaagaggagatgaag
acatcttga
DBGET
integrated database retrieval system
