Neisseria flavescens: FAH67_01455
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Entry
FAH67_01455 CDS
T06171
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nfv
Neisseria flavescens
Pathway
nfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAH67_01455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfv03019
]
FAH67_01455
Enzymes [BR:
nfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FAH67_01455
Messenger RNA biogenesis [BR:
nfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FAH67_01455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QCL69952
LinkDB
All DBs
Position
complement(276676..278070)
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AA seq
464 aa
AA seq
DB search
MMNPFSSLGLGSELVSALTDQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLP
SLERLKRYATSSTSPAMHPVRMLVLTPTRELADQIDQNVQAYIKNLPLRHTVLFGGVNMD
KQTADLRAGCEIVVATVGRLLDHVKQKNINLNKVEIVVLDEADRMLDMGFIDDIRKIMQM
LPKQRQTLLFSATFSPPIRKLAQDFMHTPEMVEVAAQNTTNANVEQHIIAVDALKKRNLL
ERLIVDLHMNQVIVFCKTKQSVDQVTRDLVRRNIAAQSIHGDKSQQSRLETLNAFKEGTL
RVLVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDKTEQKM
FESIKELTGSDLNVERIEGFEPHWWGNDNQDEAEAQPVQHNDSRSRRDDRNKRNEYANKS
DKNSKKVEEKNDPGIVCGKIAGRTRRSRHKRQPCALLQPGFGVK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atcatgaatcctttctcttcactcggtttaggcagcgaattagtctctgccctgaccgat
cagggttatgaaaacccgacgcctattcaagccgcagcgattcctaaagccttggcagga
cacgaccttttggccgcagcacaaaccggcacaggcaaaaccgccgcctttatgctgccc
agcctcgaacgcctgaaacgctacgccacatccagcacctcccctgccatgcatcctgtc
cgcatgttggtattgaccccaacccgcgaactggccgatcaaatcgatcaaaacgtgcag
gcctacattaaaaatcttcctttgcgccacaccgtcctcttcggcggcgtcaatatggac
aaacaaactgccgacttgcgcgccggttgcgaaatcgttgtcgctacggttggccgactg
ctcgaccacgttaaacaaaaaaacatcaatttaaacaaagttgaaatcgttgtactcgat
gaagccgaccgtatgcttgatatgggttttatcgacgatatccgtaaaatcatgcagatg
ctgcccaaacagcgacaaaccctgcttttctccgccactttctcaccacctatccgcaag
cttgcgcaagattttatgcacacgcctgaaatggttgaagtggctgcgcaaaacaccacc
aacgccaatgtcgagcaacacatcattgccgttgatgcactcaaaaaacgcaacctgctc
gaacgtctgattgttgatttgcatatgaatcaagtcattgtattctgcaaaaccaaacaa
agtgtcgatcaagttacccgagacctcgtccgtcgcaacattgccgcgcaatccatccac
ggcgacaaatcccaacaaagccgactggaaaccctcaacgcctttaaagaaggtacattg
cgcgttctggttgccactgacgttgcagcgcgcggcctggatattgccgagttgcctttc
gtcatcaactacgagctgccaacccaacctgaagactacgtccaccgcatcggacgtacc
ggccgggccggtgccgacggcgttgccatttccttaatggataaaaccgagcagaaaatg
tttgaatccattaaagagctgaccggcagcgatttgaatgtggaacgcatcgaaggcttt
gagccgcattggtggggcaacgacaatcaagatgaagccgaagcgcaaccggttcagcac
aacgacagccgctctcgccgcgatgatagaaacaaacgcaacgaatacgcgaataaatca
gacaaaaactcgaaaaaagtagaagagaaaaacgatccgggtattgtctgcggcaaaatt
gccggtagaacacgccgcagccgtcacaagcgtcagccttgcgccctgctccaacctggc
tttggcgtaaagtaa
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