Neisseria flavescens: FAH67_04380
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Entry
FAH67_04380 CDS
T06171
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nfv
Neisseria flavescens
Brite
KEGG Orthology (KO) [BR:
nfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfv03032
]
FAH67_04380
03036 Chromosome and associated proteins [BR:
nfv03036
]
FAH67_04380
03400 DNA repair and recombination proteins [BR:
nfv03400
]
FAH67_04380
DNA replication proteins [BR:
nfv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FAH67_04380
Chromosome and associated proteins [BR:
nfv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FAH67_04380
DNA repair and recombination proteins [BR:
nfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FAH67_04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
UBA_7
UBA_HYPK
Lmo2446-like_N
HTH_10
Myb_DNA-bind_8
Trp_ring
DUF937
HU-DNA_bdg
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QCL68726
LinkDB
All DBs
Position
complement(852562..852831)
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AA seq
89 aa
AA seq
DB search
MNKSELIEAIAQEAGISKSAAQKALDATTNAVTNALKNGDTVTLVGFGTFYVGERAERQG
RNPKTGEPLTIAAAKTPKFRAGKALKDAL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctgaattgatcgaagcaattgctcaagaagccggcatttccaaatctgct
gcgcaaaaagctttggatgctactactaatgccgtaaccaacgcattgaaaaacggcgac
actgttactctggtcggtttcggtactttctacgtcggcgaacgcgccgaacgtcaaggc
cgcaaccctaaaaccggcgagcctttgactattgctgccgctaaaactcctaaattccgt
gccggtaaagcattgaaagacgctctgtaa
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