Neisseria flavescens: FAH67_04640
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Entry
FAH67_04640 CDS
T06171
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nfv
Neisseria flavescens
Pathway
nfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAH67_04640 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfv03019
]
FAH67_04640 (pnp)
03016 Transfer RNA biogenesis [BR:
nfv03016
]
FAH67_04640 (pnp)
Enzymes [BR:
nfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FAH67_04640 (pnp)
Messenger RNA biogenesis [BR:
nfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FAH67_04640 (pnp)
Transfer RNA biogenesis [BR:
nfv03016
]
Prokaryotic type
tRNA degradation factors
FAH67_04640 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
Methyltransf_FA
DUF5813
S1_RRP5
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QCL68770
LinkDB
All DBs
Position
complement(899486..901609)
Genome browser
AA seq
707 aa
AA seq
DB search
MMFNKHVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVLVAVTTNKEVKEGQDFFPL
TVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVS
VDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGVYVLNPTKAELAKSQLDLVV
AGTSKAVLMVESEADILSEEVMLGAVVYGHDQMQVAINAINEFADEVNPEVWDWKAPETN
EELLAKVRGIAGETIKEAFKIRQKQARSAKLDEAWNAVKEALITEETDTLAANEIKGIFK
HLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGVLPRTHGSALFTRGETQALAVATLGT
SRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRVGAPKRREIGHGRLAKRALLAVLPKP
EDFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILEGNKFAVL
TDILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALAQAKEARLHILDQMK
AAVAGPQELSAHAPRLFTMKINQDKIREVIGKGGETIRSITAETGTEINIAEDGTITIAA
TTQEAGDAAKKRIEQITAEVEVGKVYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHE
RVRNVGDYLQVGQVVNVKALEVDDRGRVRLSIKALLEAPAREEKAAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcaataaacacgttaagaccttccaatacggtaatcaaaccgttactttggaa
accggcgaaattgctcgccaagccgctgctgccgttaaagtatctatgggcgacaccgtt
gttttggttgccgttactaccaacaaagaagtaaaagaaggtcaagacttcttccctctg
actgtcgattacctcgagcgtacttacgcagcaggtaaaatccccggcggtttcttcaaa
cgcgaaggaaaacaaagcgaaaaagaaatcctgaccagccgtctgattgaccgtccgatt
cgccctctgttccctgaaggtttctatcacgacatccaaatcgtagcgatggtggtgtct
gttgaccctgaaattgattctgacattcctgcaatgttgggcgcatctgccgcgctggtg
ttgagcggcgtaccgtttgccggtccgattggtgcggcacgcgtgggttatgtaaacggc
gtgtacgttttgaatccgactaaagccgaattggctaaatcacaattggacttggttgtt
gccggtacttctaaagccgtgttgatggtggaatctgaagccgacatcttgtctgaagaa
gtgatgctgggtgcggttgtttacggtcacgatcaaatgcaagtggccattaacgccatc
aatgagtttgccgacgaagtcaacccggaagtttgggattggaaagcacctgaaaccaat
gaagaattgcttgccaaagtacgcgggattgccggcgaaaccattaaagaagcgttcaaa
atccgtcaaaaacaagcgcgttccgccaaattggacgaggcttggaatgcggtaaaagaa
gccttgattaccgaagaaaccgacactttggccgccaacgaaatcaaaggcattttcaaa
cacttggaagccgatgttgtccgcagccaaattttggacggacaaccgcgtatcgacgga
cgcgacacacgcaccgtccgcccgctgaacatccaaaccggcgtattgccgcgcacgcac
ggttctgccttgtttacccgtggcgaaacccaagctttggcggttgcaactttgggtact
tcgcgcgacgagcaaatcattgacgcgctgtccggcgaatacaccgaccgctttatgctg
cactacaacttccctccatactctaccggcgaagtgggtcgcgtaggtgcgccgaaacgc
cgtgaaatcggtcacggccgtttggctaaacgtgcattgttggccgtattgccgaaacct
gaagatttcagctacaccatgcgcgttgtctccgaaattaccgaatccaacggctcttcc
tctatggcttccgtctgcggtggctgcttgagcctgttgtctgccggcgtgcctttgaaa
gcacacgttgccggtatcgcgatgggtctgattttggaaggtaataagtttgccgttctg
accgacattttgggcgacgaagaccacttgggcgatatggactttaaagtggccggtacg
accgaaggcgtaaccgcgctgcaaatggacatcaaaatccaaggcattaccaaagaaatc
atgcaaatcgctttggcgcaggccaaagaagcgcgtctgcacatcttggatcagatgaaa
gccgccgttgcaggcccacaagagctgtctgcacacgcgccacgcttgtttacgatgaaa
atcaaccaagacaaaatccgcgaagttatcggtaagggcggcgaaaccatccgttcgatt
accgctgaaaccggtacggaaatcaatattgccgaagacggtacgattaccattgccgcg
acgacccaagaagccggcgatgcggcgaaaaaacgcatcgaacagattaccgccgaagtg
gaagtgggcaaagtgtacgaaggtactgtggtgaaaatcctcgacaacaacgtcggcgcg
attgtcagcgtgatgccgggcaaagacggtttggtacacatcagccaaatcgcccacgag
cgcgtacgcaatgtcggcgactacctgcaagtcggtcaggtcgtaaatgtaaaagcattg
gaagtagacgatcgcggccgcgtacgcctgtctatcaaagctttgctggaagcgcctgca
cgcgaagagaaagccgccgaataa
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