Neisseria flavescens: FAH67_05850
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Entry
FAH67_05850 CDS
T06171
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nfv
Neisseria flavescens
Pathway
nfv03030
DNA replication
nfv03430
Mismatch repair
nfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAH67_05850
03430 Mismatch repair
FAH67_05850
03440 Homologous recombination
FAH67_05850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfv03032
]
FAH67_05850
03400 DNA repair and recombination proteins [BR:
nfv03400
]
FAH67_05850
Enzymes [BR:
nfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAH67_05850
DNA replication proteins [BR:
nfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAH67_05850
DNA repair and recombination proteins [BR:
nfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAH67_05850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
c-SKI_SMAD_bind
Motif
Other DBs
NCBI-ProteinID:
QCL68984
LinkDB
All DBs
Position
1133378..1134769
Genome browser
AA seq
463 aa
AA seq
DB search
MSDFARWPLLSEAFSRLGRPVVVVDLETTGGNFYQDRITEVALVRFEQGRATHYEQLVNP
CRSIPEFVARLTGIHDETVKNAPVFADIAADLLPLLQGAVVVAHNSRFDYTFLRHEFARI
HTDFAAPSLCTVQLSRRLYPEFYKHSLDSIIERTGIQTANRHRAMTDVAALCDYLELSLA
EKNHQQWDEHVRVLMNPKMLPTWLPDSLAQQLYALPDSYGVLVWLDHFGKAQAIEAHERA
YSETATLLHSKKLPPHIKAAASIRFIPAVGQLHTLWLKAQTMQEYQLMPSEKSTSFSTVR
FIADEHGSLQARIVLLNSGTRNWRPYGLFAHKKAAKRALTQWSQEHKLCPDSLNILPTSY
AKGEPCPVEAVGKCNGNCRQPNGIKHQNQRITELAALLPVTDWGKAHEIEITETDPLTGN
SITLLCAGGALALPDGSWYFDSSLPLVIKNKFRQDKENIRLIA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttcgcacgctggccgctcttatccgaagcattttcccgtttgggacggcct
gtggtcgtggtagatttggagacgaccggtggaaatttctatcaagacaggataacggaa
gttgcccttgttcgttttgagcaaggacgcgccacacattacgagcaattggtcaatcct
tgccgcagcatacccgaatttgttgccagactgaccgggattcatgatgaaacggtgaaa
aacgcacctgtctttgccgatattgcagccgatttgttgccgctattgcaaggtgctgtg
gttgttgcccacaacagccgctttgactataccttcctgcgtcacgagtttgcccgtatc
catactgactttgccgcaccctcgctctgtacggttcaactgtcgcgccgcctctatcct
gagttttacaaacacagtctcgacagcattatcgaacgcaccggcattcagacggccaac
cgccaccgcgccatgaccgatgttgccgcattgtgtgattatctcgaattaagtctggca
gaaaaaaatcatcaacaatgggacgaacacgtccgtgtattgatgaatccgaaaatgttg
cccacttggctgcctgattcgcttgcccaacagctctatgccctgcccgacagttacggc
gtattggtttggcttgaccatttcggcaaagcccaagctattgaagcacacgaacgcgca
tacagtgaaaccgccaccctgctgcacagcaaaaaactgccgccgcacatcaaagccgca
gcctccatccgttttattccggcagtcggacagctccatacattatggctcaaagcccag
accatgcaagaataccaactgatgccgtcagaaaagtccacatcgttttctaccgtccgc
tttatcgctgacgaacacggcagccttcaagcacgcattgtcttgttaaacagcggcacc
agaaactggcgcccttacggtttgtttgcccacaaaaaagcagccaaacgcgctttgacg
caatggtcgcaagaacacaaactctgtccagattcactcaatattttgccgaccagctac
gcaaaaggcgaaccctgccctgtcgaggccgtcggaaaatgcaatggcaactgtcgccag
ccaaacggtatcaaacatcaaaaccaacgcattaccgagcttgccgccctactccccgta
accgattggggcaaagcgcacgaaattgaaattaccgaaaccgaccccctgaccggaaac
agtattaccctgctctgcgccggcggcgcgttggcattgcctgatggaagctggtatttc
gacagcagcctgcctctcgtgattaaaaacaaattcaggcaagacaaagaaaatatccgt
ttgattgcttaa
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