Neisseria flavescens: FAH67_07250
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Entry
FAH67_07250 CDS
T06171
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nfv
Neisseria flavescens
Brite
KEGG Orthology (KO) [BR:
nfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfv03009
]
FAH67_07250 (rlmD)
Enzymes [BR:
nfv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FAH67_07250 (rlmD)
Ribosome biogenesis [BR:
nfv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FAH67_07250 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
Methyltrans_SAM
Methyltransf_15
MTS
UPF0020
Methyltransf_11
Methyltr_RsmB-F
RrnaAD
Methyltransf_23
PrmA
PCMT
Methyltransf_32
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QCL69221
LinkDB
All DBs
Position
complement(1410977..1412302)
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AA seq
441 aa
AA seq
DB search
MGVKEQYQETEVFSLDYEGRGVARVDGKTVFIGGALPGERVTFVIHKEKKQFAEAQVEKV
LKASSERVEPACCYFDTCGGCSLQHVSFGAQVALKQRILEEQLERIGKVKPGIILSPLYG
YSWYYRDRARLSVSVDKQGRLKLGFQAKKSHDVVNIRHCQILPKHVSDRLPDVRNLLQKL
HDDGVKVKFVEFYCGKNVTVLNIRFVNQPFGQILSELRNWFDKILSGAEKAWQIWLQDHA
ESLPFYPENAPALNYTFAQFDVEMPYKPGDFTQINAQLNEVMVARAVRLLNPQKGERIAD
LFCGLGNFSLPLAKSGASVVGIEGADYLVDRARENARLNRCAENITFSVADLFDTDEKIV
ESWGQFDKMLLDPPRNGAYAVVKSLHKPFLPQKIVYVSCNPSTFARDAGVLVDKGYKFKA
AGIMNMFAQTSHVESIGVFEL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgaaagaacagtatcaagagacggaagttttttctttggattatgagggcagg
ggtgttgccagagtcgatgggaagactgtatttatcggcggtgcgctgcctggagaacgt
gtaacgtttgtcatacataaagagaaaaagcagtttgccgaggctcaagttgaaaaggtt
ttgaaggcttcttccgaacgtgtcgagcccgcatgttgctattttgatacatgtggcggc
tgttcacttcaacatgtttctttcggagcacaagttgcgttaaagcaacggattttggaa
gagcagttggaacggataggtaaggtcaagccgggaataattttatcccctttatatggt
tactcctggtattatcgcgatagagcacgtttgagtgtttcggtggataagcaaggccgt
ctgaaactcggttttcaggccaaaaaaagccatgatgtcgtcaatatccgccattgccag
attttgcctaaacatgtgtccgatagattgcctgatgtccgtaatttgctgcaaaagctg
catgatgacggtgtaaaagtgaaatttgttgagttttattgcggaaaaaatgtgacggtg
ctcaacattcgtttcgtaaatcaaccgtttggacaaatattaagcgaattgcgtaattgg
tttgataagatattgtcgggtgctgaaaaggcatggcaaatatggctgcaagatcatgcc
gagtccttgccgttttatcctgagaacgcgcctgccctgaactatacttttgctcaattt
gatgtggaaatgccttacaaacccggtgactttacgcagattaatgcgcagctgaacgaa
gtgatggtggcaagggctgttaggcttttaaatcctcaaaaaggggaacggattgccgat
ctgttttgcggtttgggtaatttcagtttgccgctggcaaaaagtggcgcatcggttgtc
ggtattgaaggcgccgattatttggtcgatagggcaagggaaaatgcacgcctgaatcgt
tgtgctgagaatataacgttttctgtcgcagacttattcgataccgatgaaaagattgtt
gagtcgtgggggcaatttgacaagatgttgctggatccgccgagaaacggggcttatgct
gttgtcaaatcgctacacaaaccgtttttgcctcagaagatagtgtatgtttcgtgtaat
ccatcaacatttgcacgagatgccggtgtcttggttgataagggctataagtttaaggcg
gcaggaatcatgaatatgtttgcgcaaacctcacatgttgaatctatcggtgtgtttgag
ttgtaa
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