Neisseria flavescens: FAH67_09955
Help
Entry
FAH67_09955 CDS
T06171
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nfv
Neisseria flavescens
Pathway
nfv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nfv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FAH67_09955 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfv03021
]
FAH67_09955 (rpoC)
03400 DNA repair and recombination proteins [BR:
nfv03400
]
FAH67_09955 (rpoC)
Enzymes [BR:
nfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FAH67_09955 (rpoC)
Transcription machinery [BR:
nfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FAH67_09955 (rpoC)
DNA repair and recombination proteins [BR:
nfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FAH67_09955 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QCL69695
LinkDB
All DBs
Position
1939357..1943532
Genome browser
AA seq
1391 aa
AA seq
DB search
MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA
KMGAEGIRELLRTLDITGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLASTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH
TKQVELGTKITVRLREWVKNEAGEFEPVVNRYETTVGRALLSEILPKGLPFEYINKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEAN
AEVKEIEDQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRER
ILGRVTASDVVDPSTGETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA
RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGAAIKAGQTL
ATWDPHTRPMITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSGSASKLLRP
TVKLLDENGVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITG
GLPRVAELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII
RQMLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQGVE
QETAETQVTDE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgttgaacttatttaatccgttgcaaactgccggcatggaagaagagtttgat
gccatcaaaatcggtattgcctctcccgaaaccatccgctcatggtcttatggcgaagtt
aaaaaacctgaaaccatcaactaccgtacgttcaaacctgagcgcgacggtttgttctgc
gccaaaatctttggcccggtcaaagactatgaatgtttgtgcggcaaatacaaacgcttg
aaatttaaaggcgtaacctgtgaaaaatgtggcgtagaagtgaccctgtccaaagtgcgc
cgcgaacgcatgggccacattgaattggctgcacctgttgcccacatttggttcttgaaa
tctctgccttcccgcttgggtatggtactggacatgactttgcgcgatatcgaacgcgta
ttgtactttgaagcatttgtggtaaccgatcccggtatgactccgttgcaacgtcgtcaa
ttgctgactgaagacgattactacaacaaactggacgaatacggcgacgacttcgatgcc
aaaatgggtgcagaaggtattcgtgaattgttgcgcaccttggatattactggcgagatc
gaaatcttgcgtcaagagctggaatctaccggttctgacaccaaaatcaaaaaaatcgcg
aaacgtttgaaagtattggaagccttccaccgttccggtatgaaactggaatggatgatt
atggacgtgctgccggtattgccgcctgatttgcgtccgttggttccattggatggtggt
cgttttgccacttccgatttgaacgatttgtaccgccgcgttattaaccgtaacaaccgt
ctgaaacgtctgttggaactgcatgcgcctgacatcatcgttcgtaacgaaaaacgtatg
ttgcaagaagcagttgactcgctgttggataacggccgtcgcggtaaagccatgaccggt
gccaacaaacgtccgctgaaatcattggctgacatgattaaaggtaaaggcggccgcttc
cgtcaaaacctgctgggtaaacgtgtggactactctggtcgttccgtgattactgtaggc
ccatacctgcgtctgcaccaatgtggtctgccgaaaaaaatggcgttggaactgttcaaa
ccatttattttccacaaattggaaaaacaaggtttggcttctaccgttaaagcagcgaaa
aaattggtagaacaagaagtaccggaagtatgggacatcttggaagaagtaatccgcgaa
catccgattatgctgaaccgtgcgccgaccctgcaccgtttgggtattcaagcgtttgaa
cctatcctgattgaaggtaaagcgattcagttgcacccattggtgtgtgccgcatttaac
gccgactttgacggtgaccaaatggcggtacacgttccattgagcttggaagcgcaaatg
gaagcgcgcaccctgatgctggcttcaaacaacgtattgtctccagccaacggcgaacca
atcatcgtaccttctcaagatatcgtattgggtctgtactacatgacccgcgaccgtatc
aatgccaaaggcgaaggcagcctgtttgccgatgtgaaagaagtgcatcgtgcataccat
accaaacaggttgaactgggtactaaaattaccgtacgtctgcgcgaatgggtgaaaaac
gaagccggtgaattcgagcctgtcgttaaccgttacgaaacaaccgtaggccgtgcattg
ttgagcgaaatcttgcctaaaggcctgccgttcgagtacatcaacaaagcgctgaagaaa
aaagaaatttctaaactgattaacgcatcattccgtctgtgcggcttgcgtgacacagtt
attttcgccgaccacctgatgtataccggtttcggttttgcggctaaaggcggtatttcc
attgcggttgacgatatggaaattccgaaagaaaaagcagccttgctggccgaggctaat
gccgaagttaaagaaatcgaagaccaataccgtcaaggtttggtcaccaacggcgaacgt
tacaacaaagtggtcgatatttggggtcgtgccggagataagatcgctaaagcgatgatg
gacaacctgtccaaacaaaaagtcatcgaccgtgacggcaacgaagttgatcaagagtcc
ttcaactctatttacatgatggccgactccggtgcccgtggttctgcggctcagattaaa
cagttgtccggtatgcgtggtttgatggctaaacctgacggctcgattattgaaacgccg
attacctcaaacttccgtgaaggtctgaccgtattgcaatactttattgcgacccacggt
gcgcgtaagggtttggcggataccgcgttgaaaactgcaaactccggttacttgacccgt
cgtttggtagacgtaacccaagacttggtggttgttgaagacgattgcggtacttcagac
ggctttgtgatgaaagcagtggtacaaggcggtgacgtaattgaagccttgcgtgagcgt
attttgggccgcgttactgcttctgatgttgtcgatccttcgactggcgagactttggtt
gaagccggtacattgttgaccgagaaactggtagatatgatcgaccaatccggtgtcgat
gaagtcaaagtccgtacaccgattacttgtaaaacccgccatggcctgtgtgcacactgt
tatggtcgcgacttggcacgcggcaaactggttaatgccggtgaagcagtcggcgtgatt
gccgctcagtctatcggtgaaccgggtactcagctgaccatgcgtacgttccacatcggt
ggcgcggcatcccgtgcggcagcagccagccaagtagaagccaaatccaacggtacagca
cgtttcagcagccaaatgcgttacgttgccaacaacaaaggcgaattggttgtcatcggt
cgttcttgcgaagtcgttattcatgatgacatcggtcgtgagcgcgaacgccacaaagta
ccttacggtgcaatcctgctggtacaagacggcgcagccattaaagccggtcaaacgttg
gcgacttgggatccgcatacccgtccgatgatcaccgaacatgcaggtatggtgaaattt
gagaacgtggaagagggtgttaccgttgccaaacaaactgacgatgtaaccggtttgtcc
actttggtggtgattgacggcaaacgccgctccggcagcgcatccaaactgctgcgtccg
actgtaaaattgttggatgaaaacggcgtggaaatctgtattcccggtacgtccactccg
gtttcgatggcattccccgttggtgcggtgattaccgtacgcgaaggtcaggaaatcggt
aaaggcgacgtattggcgcgtattccgcaagcctcttccaaaacccgcgacattaccggt
ggtctgccgcgcgttgccgagctgtttgaagcacgcgtgccgaaagatgcaggtatgctg
gcggaaattaccggtaccgtttccttcggcaaagagaccaaagggaagcaacgtctgatt
atcactgacgtggacggtgtagcatacgaaaccctgatttctaaagagaaacagattctg
gtacacgacggtcaagtggtaaaccgcggtgaaaccatcgtggacggagctgttgatccg
catgatattctgcgtctgcaaggtatcgaagcactggcacgctacattgtccaagaggtg
caagaggtttaccgcctgcaaggtgtgaagatttccgataagcacatcgaagtcatcatc
cgtcaaatgttgcgccgtgtgaacattgcggatgccggcgaaaccgggttcattaccgga
gagcaggtcgaacgcggcgatgtgatggctgccaatgaaaaagctttggaagaaggcaaa
gagccggcacgttacgaaaacgtattgctgggtattaccaaagcctccctgtccaccgac
agtttcatttctgccgcatcgttccaagaaacgacccgtgttctgaccgaagccgcgatt
atgggcaaacaagacgaactgcgcggtttaaaagagaacgtcatcgtcggccgcctgatt
cctgccggtaccggtttgacttatcaccgcagccgtcatcagcaatggcaaggggtagag
caggagactgctgaaacccaagtaacggatgaataa
DBGET
integrated database retrieval system
