Neisseria flavescens: FAH67_10265
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Entry
FAH67_10265 CDS
T06171
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nfv
Neisseria flavescens
Pathway
nfv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FAH67_10265 (hrpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfv03041
]
FAH67_10265 (hrpA)
03009 Ribosome biogenesis [BR:
nfv03009
]
FAH67_10265 (hrpA)
Enzymes [BR:
nfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FAH67_10265 (hrpA)
Spliceosome [BR:
nfv03041
]
Complex A
U2 snRNP components
U2 related factors
FAH67_10265 (hrpA)
Complex B
FAH67_10265 (hrpA)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FAH67_10265 (hrpA)
Ribosome biogenesis [BR:
nfv03009
]
Eukaryotic type
90S particles
Helicases
FAH67_10265 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
AAA_23
nSTAND3
ABC_tran
NACHT
AAA_30
T2SSE
ResIII
AAA_11
RsgA_GTPase
ATPase
SLFN-g3_helicase
SRP54
AAA_25
PhoH
AAA_29
cobW
Motif
Other DBs
NCBI-ProteinID:
QCL69754
LinkDB
All DBs
Position
2011065..2012459
Genome browser
AA seq
464 aa
AA seq
DB search
MPQPDFAQTLSKDRHFLRSAFKNPNKYGGLAKVEEKYKKSHDLYLQRLSKLPKPEFDNTL
PVHEKLDEIKKAIAENQVTIICGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAARS
VAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGILLAETQTDRYLAAYDTIIID
EAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAERFSRHFNGAPVLEVSGRTYPVE
ILYRPLTGKDEDDAEVELTDAIVDAADELARYGEGDILVFLPGEREIREAAEALRKSTLR
RNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATNVAETSLTVPGIKYVIDTGLARVKRY
STRAKVEQLHIEKISQAAARQRSGRCGRVSAGVCIRLFSEEDFNSRPEFTDPEIVRSNLA
AVILRMAALKLGDVAAFPFLEMPDSRYINDGFQVLLELGAVEAV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaacccgatttcgcccaaaccctctccaaagaccgccattttctgcgatctgcc
tttaaaaacccgaataaatacggtggcttggccaaggttgaggaaaaatacaaaaaatcg
cacgacctctatctgcaacgcctgtccaaactgcccaagcccgaattcgacaacacgctg
cccgttcacgaaaaactcgacgaaatcaaaaaagccattgccgagaatcaggtaacgatt
atttgcggcgaaaccggttctggcaaaaccacgcagctgcccaagatttgtttggaactc
gggcgcggggcggcaggattgatcgggcatacccagccacgccgtttggccgcgcgttcc
gtagcagagcggattgccgaagagctgaaatcggaaatcggcagcgcggtcggctataaa
gtacgcttcaccgaccacacctcgcgcgatgcctgcgtcaagctgatgaccgacggcatc
ctgctggcggaaacgcagaccgaccgttatctcgccgcctacgacaccatcatcatcgac
gaagcgcacgagcgcagcctgaacatcgacttcctcttgggctacctaaaacaactcctg
ccgcgccgccctgacttgaaagtcatcatcacctcggcaacgatagacgcagaacgcttc
tcccgacacttcaacggcgcgcccgtgctggaagtgagcgggcgcacctatcccgtcgaa
atcctctaccgaccgctgaccggcaaagacgaagacgacgcagaagtcgagctgaccgac
gcgattgtcgatgccgccgacgaattggcgcgatatggcgaaggcgatattttggtgttc
ctgccgggcgaacgcgaaatccgcgaagccgccgaagccctgcgcaaatccacactgcgc
cgcaacgacgaaatcctgcccctgttcgcacgcctgtcgcacgccgaacagcacaaaatc
ttccacccctccggcgcaaaacgacgcatcgtgctggcaaccaacgtcgctgaaacctcg
ctcaccgtgccgggcatcaaatacgtcatcgacaccggcctcgcacgcgtcaaacgctat
tccacacgggcgaaagtggagcagcttcatatcgaaaaaatctcccaagccgccgcccgc
caacgatccggccgctgcggacgcgtctccgcaggcgtgtgtatccgactgttttcagaa
gaagattttaacagccgtcccgaatttaccgaccccgaaatcgtccgcagcaacctcgcc
gccgtcatcctgcgcatggcagcattgaaactcggcgatgtggcagcattcccgttttta
gaaatgcccgattcacggtatatcaatgacggttttcaggtgttgttggagttgggggcg
gtggaggccgtctga
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