Candidatus Nitrososphaera gargensis: Ngar_c01540
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Entry
Ngar_c01540 CDS
T02305
Symbol
rpoH
Name
(GenBank) DNA-directed RNA polymerase subunit H
KO
K03053
DNA-directed RNA polymerase subunit H [EC:
2.7.7.6
]
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ngar_c01540 (rpoH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nga03021
]
Ngar_c01540 (rpoH)
Enzymes [BR:
nga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ngar_c01540 (rpoH)
Transcription machinery [BR:
nga03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Ngar_c01540 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb5_C
CDC48_N
FeoA
Motif
Other DBs
NCBI-ProteinID:
AFU57103
UniProt:
K0IE60
LinkDB
All DBs
Position
118804..119052
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AA seq
82 aa
AA seq
DB search
MSEKKVVKITNHAYQPKHEILPKKEAEEILKKYNAKPSQLPYIMISDKALEDLDVRPGDI
IKITRKSPTAGESVYYRYVVEG
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaaaagaaggtcgtcaagataacgaaccacgcttaccaaccaaagcatgaaatt
ctgccgaaaaaggaagcagaggaaattctgaaaaagtacaacgccaaaccaagccagctg
ccgtacatcatgataagcgacaaggcccttgaagatcttgacgtccggcccggcgacatt
atcaagatcacgagaaagagcccgactgcgggtgaaagtgtatattaccgatacgtcgta
gagggttga
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