Candidatus Nitrososphaera gargensis: Ngar_c02250
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Entry
Ngar_c02250 CDS
T02305
Symbol
cdc48
Name
(GenBank) AAA family ATPase, CDC48 subfamily
Organism
nga
Candidatus Nitrososphaera gargensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_14
TIP49
AAA_5
AAA_22
AAA_33
AAA_28
Sigma54_activat
IstB_IS21
RNA_helicase
nSTAND3
AAA_7
ABC_tran
Mg_chelatase
ATPase
PhoH
NPHP3_N
TsaE
AAA_24
AAA_18
Zeta_toxin
DUF815
NACHT
AAA_lid_PRS2_C
Parvo_NS1
Cytidylate_kin
ATPase_2
AAA_17
bpMoxR
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AFU57173
UniProt:
K0IEI3
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All DBs
Position
complement(179115..181268)
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AA seq
717 aa
AA seq
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MEAYARDVGKGIARIDYDTMASLGVAAGDVLEIKGSRRTVAKCLPLYPSDEGKNSIRIDG
LMRNNAGVGIGDMANAKKVKAVPAEKILVSPLEAMPPIDERYISDSLENTPLVKGDNIML
PYFGGRLTFQVVGVTPPADAVLVTSKTLFTITEKDADLRGMPHVSYEDIGGLKDELQKVR
EMIELPLRHPEIFEKLGIEAPKGVLLFGPPGTGKTLLAKAVASESNAHFITISGPEIMSK
FYGESEARLREIFKEAKDKAPSIIFIDEIDSIAPKREEVTGEVERRVVSQMLSLMDGLEG
RGKVIVIAATNRQNALDPALRRPGRFDREIEIKVPDKHGRLEILQIHSRNMPLDTDVDQP
RIAAVSHGFVGADLEYLCKEAAMKCLRRLLPELNMEEDKLPPATLDKLIITQNDFDQAIR
DVTPSAMREVFLESPDVKWQDIGGLDGVKRELQEAVEWPLRYPDLYAKLGHKVPKGILLH
GPSGTGKTLLAKAVATESEANFISVKGPELVSKWIGESERGIREVFRRARQAAPCVIFLD
EIDSIAPTRGGGMEGGGGGSGTERIVSQILTEIDGISELHGVVVLGATNRPDMVDPALLR
PGRFDRIILVPNPDSKTRAKILEIHANGKPIGQDVNIQKIAEAMTEGFSGADTAAVVNTA
ISLVLHEYLAKYPTPEEAAKHATEAHIMLRHFEQAVKKIKTQRDTKPREAMALSLYK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcctatgcaagagatgtaggcaaaggcatagccaggattgattatgacactatg
gcatctttgggagtagcagcgggtgacgttctcgaaataaagggcagccgcaggactgtt
gccaaatgtttaccactttatccttcagatgagggaaaaaacagcatcaggatagatggg
ctgatgagaaataatgcaggcgtcgggataggagacatggcaaatgcaaagaaagtgaaa
gcagtcccggcagagaaaattttagtatctccactcgaagcgatgccgcctatagatgaa
cgatatatttctgattctcttgagaacactccacttgtcaaaggcgacaatatcatgttg
ccttattttggcggcaggcttacattccaagtagttggtgtaaccccgcccgcggatgcg
gtacttgtgacaagcaagactttattcaccattactgaaaaagatgcagatttgcgaggt
atgccccatgtgtcatacgaagacattgggggcttgaaggatgaactgcaaaaggtcaga
gaaatgatagagcttcctctaagacatccagagatatttgaaaaactgggaattgaagct
ccaaagggagtgctgctgttcgggcctccaggaactggcaagaccctgcttgctaaggca
gtcgcaagcgagagcaacgcgcattttattactatctccggcccggagatcatgagcaag
ttttacggagaatcagaagcgcgcttgcgtgaaatattcaaagaggcaaaagacaaggct
ccatccataatatttatcgacgaaattgattccatcgcgccaaagagagaagaagtgaca
ggcgaagttgaaaggagagtagtgtcgcaaatgttgtcattaatggatggtctcgagggc
agaggaaaagtcatcgtaattgcagctaccaacagacaaaatgcccttgacccagccttg
agaagaccgggaaggtttgaccgggaaatcgagatcaaggtgcctgacaaacatggacgg
ctggaaatccttcagattcattcccgcaatatgccgcttgacaccgacgttgaccagccc
agaatagcagcggtttcccatggttttgttggtgctgatctggaatatctatgcaaggaa
gctgcaatgaagtgccttcgcaggttgctgcccgagctgaacatggaagaggacaagttg
ccaccagcaacacttgacaagctcataataacccaaaatgattttgaccaggccataaga
gatgtcacaccctctgcaatgagagaagtcttccttgaatctccagacgtaaaatggcaa
gatattggaggtcttgatggcgtaaaacgtgaattgcaagaagctgtcgagtggccactc
agataccccgatctttatgcaaagctaggtcataaagttccaaaaggcattttgttgcat
ggaccgtctgggactggcaaaactctcttggcaaaggcagtggcgaccgaatcggaagcc
aactttatcagcgtcaagggccctgaactggtatccaagtggattggcgagtcagagcgt
ggaataagagaggtattcagaagggcaagacaggcggcgccctgtgtcatattccttgac
gaaattgactcgattgctccaacaagaggcgggggaatggaaggtgggggagggggaagt
ggaactgagagaatagtttctcagattctaacagaaatagacggcatcagcgaattgcat
ggagttgtagtcttgggcgcaactaacagacctgacatggttgaccctgcgcttttgagg
cccggcagatttgacagaataatacttgttccgaacccagatagcaagacaagggccaag
atacttgagattcatgccaatggaaagcccattggtcaggatgtgaacattcagaaaata
gcagaagcaatgacagaaggattcagcggggcagacaccgccgcagtagtaaatactgca
atatcgctcgtcctacatgaatatttggcaaaatatccaacgccagaagaggcggcaaag
catgctacagaagcgcacataatgttgcgccactttgaacaggctgtcaagaagataaag
acacagagggatacaaagccaagggaagcaatggcgttatcgctttacaaataa
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