Candidatus Nitrososphaera gargensis: Ngar_c02310
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Entry
Ngar_c02310 CDS
T02305
Symbol
tfb2
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ngar_c02310 (tfb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nga03021
]
Ngar_c02310 (tfb2)
Transcription machinery [BR:
nga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Ngar_c02310 (tfb2)
Prokaryotic type
Archaeal type
TFB
Ngar_c02310 (tfb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HTH_3
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_Crp_2
HTH_11
Phage_terminase
RB_B
Zn_ribbon_LysW
Sigma70_r4_2
Mitoc_L55
Trm112p
Motif
Other DBs
NCBI-ProteinID:
AFU57179
UniProt:
K0ILN8
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All DBs
Position
183943..184821
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AA seq
292 aa
AA seq
DB search
MCGKDQQLVTDLESGEIVCSKCGLVSSDRVQESRAEWRIFNSESNGRSRVGSPSSLAYHD
MGLATVIGKENRDSSGHQLEPSMNASIQRLRTWDFRSQAHSPTKRNLMHAFSELGRLKDK
LGLSDAIMEKTAYLYRKAHEKHLVRGRSTSSILAAAIYASCRELGASRTLKDVAKATDIK
RKAISRSYRILVLELDIKVPLADPMKCIAKIANSAKLTEKTKRMAMDTMNDLIGKEISAG
KLPMGLAATVLYMSCLANGESKTQKDIADMAGVTEVTIRNRFKDLKAKLELE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggtaaagaccagcagcttgtaacagacttggaatctggcgaaatagtatgtagc
aagtgcggccttgtatcatccgatagggtccaagaaagtcgcgcagaatggcgaatattc
aattcagagagcaatggcaggtcgagggtagggtctccttcatctcttgcctatcatgat
atgggtttggcaacagtaatcggaaaagaaaatagagattcgagcggacatcagcttgag
ccctcaatgaatgcaagtatccagagactaagaacatgggatttcagatcgcaagcacat
tcgcctacgaagagaaatcttatgcatgcctttagcgagcttggaagactgaaggataaa
ctcgggttatctgacgcgataatggaaaagactgcctatctatacagaaaggctcacgaa
aaacacttggtaaggggaaggtctacttcatccattttagcggctgctatatacgcttca
tgcagagagttgggagcctcaagaacattaaaagacgtggctaaagcgactgacatcaag
cgcaaggctatttcacgcagctaccgaattcttgtcttggaacttgacattaaggtgcct
ctggcggatccaatgaaatgcatcgccaagatagcaaacagcgcgaaattgactgagaag
accaaacggatggcgatggacaccatgaacgatctcattgggaaagagatttctgcaggc
aagcttcctatgggccttgcagcgacagttctttacatgtcttgcctagccaatggggaa
agtaaaactcaaaaagatattgcagatatggcaggagtaacggaagtcaccatcagaaat
aggttcaaggacctaaaagcaaagctggaattggagtag
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