Candidatus Nitrososphaera gargensis: Ngar_c13280
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Entry
Ngar_c13280 CDS
T02305
Symbol
dbh1
Name
(GenBank) DNA polymerase IV
KO
K04479
DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:
2.7.7.7
]
Organism
nga
Candidatus Nitrososphaera gargensis
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nga03400
]
Ngar_c13280 (dbh1)
Enzymes [BR:
nga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ngar_c13280 (dbh1)
DNA repair and recombination proteins [BR:
nga03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
Ngar_c13280 (dbh1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
DUF72
IMS_C
HHH_5
HHH_RS2-RL21-YNQ2
IMS_HHH
POLH-Rev1_HhH
IMS_HHH_1
DUF4332
TetR_C_33
Motif
Other DBs
NCBI-ProteinID:
AFU58266
UniProt:
K0IAC0
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All DBs
Position
1034136..1035971
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AA seq
611 aa
AA seq
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MTKYFVGCSGWRYGSWVSCFYPNTLGPQDYLAYYSRVFDLVSVSVQATQSRALKRWAQET
PDGFRFIVRVPRQTTDCNLLGQFLEGLAAIEEKILAVVLQVPATLKLLEGREWLDKLLGT
CVYHGYSAVVEFGNASWFQDITYNILRRHGAAIMWSDRHFDPVVTSDFVCLHLSRGNSND
QALIDKVKEQAGQEQLEFTAITVDSPDRANKVLKMLGLPERKYAGPLPAPLLPSKEPWTG
RVVMCVDLNAFYPSCEELREPALAGKPHAVIMTDQKRDRITKGVVSSCSYEARKFGVRSA
MPLTRALALCPDLVLRLVDIPYYQQVSEKVMGVLEQFADALEQASIDEAFLDCTKSAAAD
PYEYAARIKAAVMEQCGLRVSIGVAPSKSIAKIASDFKKPDGLTVVHPQQMEKFLAPLEV
GRISGIGPKKQQALKKVGVETIGQLAACDVQKLMERFGRNGLWMWRVANGSDDEAVQPRE
EHVSLSTEHTLDEFTRDRDRILVYLSELVDEIYDRLVRRGYMFRTVGVKLVRSDFTIETR
EMSFTDLQAKRESISSVIEQLLGRFSLDDSAPAVRKVGLKVTNLVSINEEAGQIKMQKTM
LDYMSMPPSDI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaatattttgtcgggtgttctggctggaggtatggtagctgggtttcctgcttt
taccccaacacactcgggccgcaggactaccttgcttattactctcgcgtctttgacctt
gtttcagtcagtgtacaagccacacagagccgcgcgctaaagaggtgggcgcaagaaaca
cccgacggtttccgttttatagtcagggtgccaaggcagacaacggactgcaacctgctt
gggcagttcctagaggggcttgcagcgatagaagaaaagatacttgcggtggtgctgcag
gtgcctgccacgctgaaacttttggagggcagggaatggcttgacaagctccttggcacg
tgcgtgtaccacgggtattctgcagtagtagagtttggcaacgcctcatggtttcaggac
atcacatacaacatattgagaaggcatggcgctgccatcatgtggtcggataggcacttc
gaccctgtggtcacctctgattttgtctgcctgcacttgtctagaggcaacagcaacgac
caagcgttgatcgacaaagtaaaagagcaggccgggcaggagcagctcgaatttacagcc
atcacagtcgacagtcctgacagggccaacaaagtgctcaagatgctgggcctgccagaa
agaaaatacgccggcccgctccctgcaccgttgcttccaagcaaggagccctggacaggc
agggtcgtgatgtgtgttgacctgaacgccttctacccttcatgcgaagagctgcgcgag
ccggcgcttgcaggcaagccccatgcggtgataatgacagaccagaagagagacaggata
acaaagggagttgtttcttcttgctcgtatgaagcgaggaaattcggcgtaagatctgca
atgccgcttacaagggcgctcgcactctgccctgacttggtgctccggctggttgacatc
ccgtactaccagcaggtctcggagaaggtgatgggagtccttgagcagtttgcagacgcc
ttggagcaggccagcatagacgaagcgttccttgactgcaccaagagcgcagctgccgac
ccttacgaatatgccgcaaggatcaaggcggctgtaatggagcagtgcggcctgcgggtc
tccataggggtggcgccgtcaaaatccattgcaaaaatagcgtcagatttcaaaaagcct
gacgggctgacggtagtgcacccgcagcagatggaaaaatttcttgcgccgcttgaagtt
ggaaggatatcggggatcgggcccaagaagcagcaggcgctgaaaaaggtcggtgttgag
accataggccagctggcggcctgcgacgtgcaaaagctgatggagaggttcggaaggaac
ggactgtggatgtggagggttgcaaacggctcagatgacgaggcggtccagccaagggaa
gagcacgtttcgctgagcaccgagcacactttggacgagttcacgcgcgacagggacaga
atacttgtttacctaagcgagctagtggacgagatctatgacaggcttgtcaggcgcggc
tacatgttccgaacagtgggggtcaagctggtaaggagcgactttaccatagagacacgt
gaaatgtcgtttacggacctgcaggcaaagcgagaaagcatatcctctgtaatcgagcag
ctgctcggcaggttttctcttgacgactctgctcctgcagtcagaaaggtcgggctaaaa
gtgacaaacctagtttcgataaatgaagaggcaggccagatcaagatgcaaaagacaatg
cttgattacatgtccatgccgccgtcagacatctga
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