Candidatus Nitrososphaera gargensis: Ngar_c13780
Help
Entry
Ngar_c13780 CDS
T02305
Symbol
tfb5
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ngar_c13780 (tfb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nga03021
]
Ngar_c13780 (tfb5)
Transcription machinery [BR:
nga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Ngar_c13780 (tfb5)
Prokaryotic type
Archaeal type
TFB
Ngar_c13780 (tfb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
HTH_AsnC-type
HTH_Tnp_ISL3
Cyclin_N
HTH_3
Zn_Ribbon_1
LacI
HEF_HK
RB_B
Motif
Other DBs
NCBI-ProteinID:
AFU58315
UniProt:
K0IEW9
LinkDB
All DBs
Position
1073695..1074552
Genome browser
AA seq
285 aa
AA seq
DB search
MVTDNSSGEMFCGNCGFVVSERIEELGPEWRAFSKEEHEDRSRAGIPTSLAMHDMGLATI
IGPVDKDASGKPLSASMKSTIERLRTWDSRSQVHEPVDRNFRQAFSELDRLKDKLAVGDA
VIEKAAYVYRKALEKGLVRGRSISALVAAALYAACRDTETPRTLKDIANASNIKKKDVAR
CYRLLIRELDLKMPVVDPVKCVARIASKAGLSEKTKRKALEILKKAEEGKISAGKDPMGL
AAAALYVACVMNGENKTQKDVAEAAGVTEVTIRNRYKGLKTHLRL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggtaacagacaactctagcggagaaatgttttgcggtaactgtggctttgtagtaagc
gaaaggatagaagagctcggaccggaatggcgcgccttctcaaaggaagagcacgaagac
agaagcagggcaggcatcccgacatcgcttgcaatgcacgacatggggcttgcgaccatc
atcgggcctgttgacaaggatgcgtcaggcaagccgctctctgcctctatgaagagcacg
atcgaaaggctcaggacatgggacagcagaagtcaggtgcacgaaccagtcgaccgcaac
ttccgccaggcattctccgagcttgacaggctcaaggacaagctggcagtaggcgatgca
gtgatcgaaaaggctgcatatgtctacagaaaagcactagagaaaggacttgtgcgcggc
cgctctatctctgcacttgtggcggcagcactgtacgccgcatgccgcgacactgaaacc
ccgaggacgctcaaggacattgctaacgcaagcaacatcaagaaaaaggacgtggcaaga
tgctatcgactgctgataagagagctggacctcaagatgcccgttgttgaccctgtgaaa
tgtgtcgctaggatcgcaagcaaggcgggtctgtcagagaagacaaagcgcaaggcactt
gaaattcttaaaaaggcagaagagggcaagatctcggccggcaaggatccgatgggcctg
gcggcagctgctctatacgttgcctgcgtcatgaacggcgagaacaaaacccagaaggac
gtggctgaagcggcaggcgttaccgaggtaacgatcaggaaccgctacaagggactcaag
acgcacctcagactttga
DBGET
integrated database retrieval system
