Candidatus Nitrososphaera gargensis: Ngar_c17700
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Entry
Ngar_c17700 CDS
T02305
Symbol
endA1
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nga
Candidatus Nitrososphaera gargensis
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nga03016
]
Ngar_c17700 (endA1)
Enzymes [BR:
nga01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Ngar_c17700 (endA1)
Transfer RNA biogenesis [BR:
nga03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Ngar_c17700 (endA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AFU58703
UniProt:
K0IIB9
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All DBs
Position
complement(1376799..1377344)
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AA seq
181 aa
AA seq
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MISGKLVESRIVIWDIPDSRTLFGSGYYGKPLGIPKPKGTDFDAPLVLDLIEGCYLVEKN
KLKVTHINGKAVPLAEIKKICKKQYVDFETQYFVFQDLRDKGYIVTPGIKFGCDFAVYEQ
GPGIDHAPYLVQVFRPADDLTATEVVLAGRLATTVKKQFILAIPKIKERKVDYVGFDWWR
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcggcaagctggttgaaagcaggattgtaatctgggacataccagattcaagg
accctctttggcagcggctattacggcaagccgcttggcattccaaagccaaaagggacg
gattttgacgcgccgctcgtgctcgacctgatagagggctgctatcttgtcgaaaagaac
aagctgaaagtaacccacattaacggcaaggccgtacctcttgcagaaataaaaaagata
tgcaaaaagcagtacgtcgattttgaaactcagtactttgtatttcaggacctccgtgac
aaaggctacatagtcacgcccggcataaagtttggttgcgattttgcagtgtacgagcag
gggcccggaatcgatcatgcgccttaccttgtgcaggtgttccggcctgcagacgatctt
acagcgacagaagtcgtgcttgctggcaggcttgcaaccacagtgaaaaaacagtttatt
ctggcgatcccgaaaataaaagaaagaaaagtggactatgtgggctttgactggtggcgc
gcctag
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