Candidatus Nitrososphaera gargensis: Ngar_c18420
Help
Entry
Ngar_c18420 CDS
T02305
Symbol
rpoE`
Name
(GenBank) DNA-directed RNA polymerase, subunit E`
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ngar_c18420 (rpoE`)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nga03021
]
Ngar_c18420 (rpoE`)
Enzymes [BR:
nga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ngar_c18420 (rpoE`)
Transcription machinery [BR:
nga03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Ngar_c18420 (rpoE`)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
AFU58775
UniProt:
K0IG60
LinkDB
All DBs
Position
1431255..1431845
Genome browser
AA seq
196 aa
AA seq
DB search
MFAIVHMSDVVRIPPNRLTHSLKDAAIQILKEKYESMISPDVGYVIMITDADTSSVGKLV
AGDGATYHKVTFKALTFYPKLQEIVEGEVVEITDFGAFVRIGPTDALLHLSQITDDYLKS
DVKQGVIVANQTARSLKIGSKLRARITAVSLGKGAGMGKIGITCRQPFLGALEWIAEEIK
KSKGGGEKEKKGGDKK
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccatagtgcacatgagcgatgttgtcagaattcctccaaacagactgactcac
tcgctgaaggacgcggccatacagatactcaaagaaaaatacgagagcatgatcagccca
gatgttggctatgtcatcatgataactgacgctgacacgagttcggtcggcaagctggtc
gccggcgacggcgcgacttaccacaaggtcacgttcaaggcgcttacgttctatcccaag
cttcaggaaatagttgaaggcgaagttgtcgaaatcaccgactttggcgcgtttgtcagg
ataggcccaaccgacgcccttctccacctctcgcagatcaccgacgactacctgaagagc
gatgtcaagcagggtgtcattgtcgcgaaccagacggcaaggtctctcaagatcgggtca
aagttgcgggcaaggattacggcggtaagcctcggcaagggagcaggcatgggcaagata
ggcataacgtgcaggcagccgttcttgggcgccctagaatggattgcagaggagatcaaa
aagtccaagggcggaggcgagaaggaaaagaagggaggagacaaaaagtag
DBGET
integrated database retrieval system
