Candidatus Nitrososphaera gargensis: Ngar_c20900
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Entry
Ngar_c20900 CDS
T02305
Symbol
fen
Name
(GenBank) flap structure-specific endonuclease
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga03030
DNA replication
nga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ngar_c20900 (fen)
03410 Base excision repair
Ngar_c20900 (fen)
03450 Non-homologous end-joining
Ngar_c20900 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nga03032
]
Ngar_c20900 (fen)
03400 DNA repair and recombination proteins [BR:
nga03400
]
Ngar_c20900 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nga04147
]
Ngar_c20900 (fen)
DNA replication proteins [BR:
nga03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
Ngar_c20900 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
Ngar_c20900 (fen)
DNA repair and recombination proteins [BR:
nga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
Ngar_c20900 (fen)
Exosome [BR:
nga04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ngar_c20900 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFU59021
UniProt:
K0ICB3
LinkDB
All DBs
Position
1628513..1629538
Genome browser
AA seq
341 aa
AA seq
DB search
MGLDLKPLVTPASLKLPELTGKVVAIDAYNTIYQFLSIIRGPTGEPLANSKGEITSHLSG
LFYRNANLLGDNIKLVYVFDGKANELKMAEIQRRSQLKKEATEKYQLAVEEGRIEDARKY
GIRTAVLTDKMVEESKKLLSYLGIPYIQAPSDGEAAAAYLTRRELAFAAASQDYDSILFG
AKKLVRNLAISGKRKVPNRNVYIDVEPEIFEHDKVLQEIGLTHEQLIDVGILIGTDFNPG
GFPGIGPKTALKLIKENGKLENVEKIKHLLPKMPYQEIRDIFLKPEVPKVDRIDFGEVNR
EKVLDFLCVDKSFSADRVSSTLDKLQKSIANRSQSLEQWFG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgggcctagacctcaagcctctcgtcacgcccgcctcgctaaagctgccagagcttaca
ggcaaggtggttgcaattgacgcctacaatacgatataccagttcctcagcattatcagg
gggccgactggcgagccactggcaaacagcaagggcgagataaccagccacctgagcggc
cttttctaccggaatgccaacctgctgggcgacaacatcaagctagtctatgtttttgac
ggcaaggcaaacgagctcaagatggcagagatacagaggaggagccagctaaagaaagag
gcgactgaaaagtaccagctggctgtagaagagggcaggattgaagatgcgcgcaagtac
ggcatccgcactgccgttctgaccgacaagatggtcgaggagtcgaaaaagctgctctcg
taccttggcattccctacatacaggcaccgtccgacggcgaagcggctgccgcatatctg
acaaggcgcgaacttgcttttgcagccgcaagtcaggattatgattcgatactatttgga
gcgaaaaagctagtgcgcaatctggcaataagcggcaagcgcaaggtgccaaaccgcaat
gtctacatcgatgtcgagccggagatattcgagcatgataaagtgttgcaagagataggg
cttacgcacgaacagctgatagatgtcggcatactgattggcaccgatttcaaccccggt
ggttttccgggcatcgggcccaagacagcactcaagctgataaaggagaatggtaagctt
gagaatgttgaaaagatcaagcacctgcttcccaagatgccataccaggaaatacgtgac
atctttctcaagccagaggtcccaaaagtagacaggatagactttggcgaggtcaaccgc
gagaaggtgctcgactttctctgtgtagataagagcttctcagcagacagagtaagcagc
acactggataaactgcaaaagtcgatagcaaaccgcagtcagtcccttgagcagtggttc
ggctag
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