Candidatus Nitrososphaera gargensis: Ngar_c21180
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Entry
Ngar_c21180 CDS
T02305
Name
(GenBank) putative iron (metal) dependent repressor, DtxR family
KO
K11924
DtxR family transcriptional regulator, manganese transport regulator
Organism
nga
Candidatus Nitrososphaera gargensis
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nga03000
]
Ngar_c21180
Transcription factors [BR:
nga03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ngar_c21180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repress
Fe_dep_repr_C
MarR_2
MarR
TrmB
LexA_DNA_bind
HTH_24
HTH_DeoR
HTH_11
HTH_Crp_2
DnaD_N
HTH_27
FeoC
Rrf2
TFIIE_alpha
HTH_23
PAX
HTH_6
wHTH-PRTase_assc
HTH_micro
HTH_5
HTH_45
AbiEi_4
DUF4423
DUF6429
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AFU59049
UniProt:
K0INA8
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All DBs
Position
1648912..1649394
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AA seq
160 aa
AA seq
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MAKKVKARPDAQHGNRLESIRDAHNAQKMGRTTRMEDYLEVIYELINQKGYATTVDISSY
LNVSSPSVTKMLQRLNESGHVNYEKYRGISLTESGTAVAKNIHDRHGVLAEFLRIIGVDE
DTANRDAEGIEHHLHPETLKKLEEFIRLVKSQGLGGLNAG
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagaaagtaaaggctaggcccgacgcacagcatggaaaccgcctcgagtctatc
cgggacgcccacaatgcgcaaaagatgggcaggacgacccgcatggaggactatctcgaa
gtcatttacgagctcattaaccagaagggctacgccaccacggtcgacatttccagctat
ctcaatgtcagctcacccagcgtcaccaagatgttgcagaggctgaacgagagcggtcat
gtcaactatgaaaagtacaggggcatcagccttacagaatcagggacggcggtggcaaag
aacatccatgacaggcacggggttctggccgagtttctcaggataataggggtcgacgag
gacactgccaaccgcgacgcagagggcatcgagcaccatctacacccagagacgctgaaa
aagcttgaagagtttatcaggcttgtaaagagccaggggcttggtggcctcaacgccggc
tga
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