Candidatus Nitrososphaera gargensis: Ngar_c23300
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Entry
Ngar_c23300 CDS
T02305
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nga
Candidatus Nitrososphaera gargensis
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nga03016
]
Ngar_c23300 (rnz)
Enzymes [BR:
nga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Ngar_c23300 (rnz)
Transfer RNA biogenesis [BR:
nga03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Ngar_c23300 (rnz)
Prokaryotic type
Ngar_c23300 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
NAD_binding_10
Glyco_trans_1_2
Anti-Pycsar_Apyc1
RNR_Alpha
Motif
Other DBs
NCBI-ProteinID:
AFU59256
UniProt:
K0ID03
LinkDB
All DBs
Position
complement(1818104..1819021)
Genome browser
AA seq
305 aa
AA seq
DB search
MANMQLVFLGTSSAAPTVERGLSSIALMRGGELLLFDAGEGMQRNFIKAGLGMNRKMKIF
ISHMHADHCVGLLGLLQTMALQGRERSIDIYGEPRVKEFLEENMRIINFGLTFDVIVHTI
KNEGVVVKEDEYQVTCCEASHSIPSFAYCLEEFDRPGAFNVKEAKRLGIPEGELYSKLQH
GQDIVYKGKKIRSSQIVGPPRKGRKVGISGDTRPTDKLAKFFHGCDVLVFESTYSQDKQQ
KAIENWHSTAAEAAAIAKKAKVGRLFLTHFSARYDETSVLVKEASAIHPNVEAAEDLKVV
EIPYP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacatgcagctcgtcttcttgggaacctcgtcggccgcgccgaccgtcgagcgc
gggctgtcctccatagcccttatgagaggaggcgagttgttgctctttgacgccggcgag
gggatgcagcgcaacttcatcaaggccggccttggcatgaacagaaagatgaagatcttt
atcagccacatgcatgcagaccactgcgtcgggctgcttggtctgctccagacgatggcg
ctgcagggaagggaaaggagcattgacatttacggcgagccaagggtcaaggaattcctt
gaagagaacatgcggataatcaactttgggctgacttttgacgtgattgtccacacgata
aaaaatgaaggcgtcgtggtgaaagaagacgagtatcaggtcacatgctgcgaagcctcg
cattcaatcccgtcctttgcgtactgccttgaggagtttgacaggcccggcgcgttcaat
gtcaaagaggcaaagaggctcgggataccagagggcgagctgtacagcaaacttcagcac
gggcaggacatcgtctacaagggcaaaaagataaggtcaagccagatagtcggaccgccg
cgcaagggcagaaaggtgggcatatctggcgacactaggccaactgacaagcttgcaaaa
ttcttccatgggtgtgacgtgcttgtctttgaatcaacctacagccaagacaagcaacaa
aaagcgatcgagaactggcactctactgcagcagaagcggcagcgatagccaagaaggcc
aaagtcggcaggctctttctgacgcactttagcgcccgctacgacgaaacctcggttctc
gtaaaggaggcaagtgccatccatcccaatgtcgaggcggctgaggacctgaaggttgta
gaaatcccatacccctaa
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