Candidatus Nitrososphaera gargensis: Ngar_c23880
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Entry
Ngar_c23880 CDS
T02305
Name
(GenBank) putative ribosome maturation protein SDO1
KO
K14574
ribosome maturation protein SDO1
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Ngar_c23880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nga03009
]
Ngar_c23880
Ribosome biogenesis [BR:
nga03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
Ngar_c23880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
TraV
HD_assoc
Phage_TAC_5
Tugs
Motif
Other DBs
NCBI-ProteinID:
AFU59313
UniProt:
K0IJH0
LinkDB
All DBs
Position
complement(1857813..1858499)
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AA seq
228 aa
AA seq
DB search
MTDKFTVARLTLDGDKFELLVKPDPALEYKLGKRADISSVLVSDEIYSDANKGSRASSEK
MMKHFKTTDAAEVAKQILARGELNLTTDQRRKMVEEKKKQIVQFINKSFVDPKTHLPHPI
IRIEAAMDEARVIIDPFKKADDQAKTVVDALRKILPLKSETAKLTVTVPPQFAAQSYSVL
KSTGDLRSEEWLSDGSLRAVLEMNASLKGQFLDRLGSVTKGSAQVKEG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaagtttacagtcgcccgcctcactctggacggcgacaagttcgagctattg
gtcaagcccgaccccgctctggaatacaagctgggcaagagggcagacatttcaagcgtg
cttgtgtcagatgagatctactctgacgcaaacaagggctcaagggcgtctagcgaaaaa
atgatgaaacacttcaagacaaccgacgcggcagaagtggccaagcagatacttgcaagg
ggcgagcttaaccttacgactgaccagcgtagaaagatggtggaggaaaagaaaaagcag
atcgtccagttcatcaacaagagctttgtggaccccaagacgcacctgccacaccccatc
attaggatagaggcggcgatggacgaggcaagggtgattatcgacccgttcaaaaaggca
gacgatcaggccaagacggtcgtggacgcactacgcaagatactgccgctcaagtcagag
actgcaaaactgacagtcactgtgccgccccagtttgctgcccagtcatacagcgtgtta
aagtcaacaggcgacctcaggagcgaagagtggctatctgacggctcgctcagagcggtg
cttgaaatgaacgccagcctcaagggacagttcctcgacaggttgggctcggtcacaaag
ggctcggctcaggtaaaggaaggctag
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