Candidatus Nitrososphaera gargensis: Ngar_c25260
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Entry
Ngar_c25260 CDS
T02305
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga03030
DNA replication
nga03410
Base excision repair
nga03420
Nucleotide excision repair
nga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ngar_c25260 (pcn)
03410 Base excision repair
Ngar_c25260 (pcn)
03420 Nucleotide excision repair
Ngar_c25260 (pcn)
03430 Mismatch repair
Ngar_c25260 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nga03032
]
Ngar_c25260 (pcn)
03400 DNA repair and recombination proteins [BR:
nga03400
]
Ngar_c25260 (pcn)
DNA replication proteins [BR:
nga03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
Ngar_c25260 (pcn)
DNA repair and recombination proteins [BR:
nga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
Ngar_c25260 (pcn)
MMR (mismatch excision repair)
Other MMR factors
Ngar_c25260 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
Ngar_c25260 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad9
Motif
Other DBs
NCBI-ProteinID:
AFU59449
UniProt:
K0INI8
LinkDB
All DBs
Position
complement(1969081..1969833)
Genome browser
AA seq
250 aa
AA seq
DB search
MVFVARSKSPEEWKAVASAISTLVDEATFEAAAEGISFRGMDPSHIALIDIHWPNHAFEK
YECDSLVKFGIRVDEFSKLIKRADKKDAIEISLGDDSMLHVKMSNGYKREYKTRLIESSA
SSTPLPKLNFNSKAVLTATAFDKVLSDVQVVSEYISIESKSGRINFSGRGDSGEADISLE
AGNEGLEELAVKEESKATYSLDYLSKITKAVISMGGSVAAEYSSKMPLRLEFKIANVGRI
HFYLAPRVQD
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttggtatttgtagctaggagcaagtcgcctgaagaatggaaggccgtggcatccgcgatc
tcaacccttgttgacgaggcaacgtttgaagcggccgcagaaggcatttcttttagaggc
atggacccgtcccatattgcgcttatagacatacactggcctaaccacgcgtttgaaaag
tacgaatgcgacagcttggtcaaattcggcataagggtagacgagttttcaaagctgata
aaaagggcggacaagaaggacgcgattgaaatcagcttgggcgatgacagcatgctgcat
gtaaagatgtcaaacggctacaagcgtgaatacaagacgcgcctgatagaaagctcggcc
agctctaccccgctgccaaagctcaactttaattcaaaagcagtgctcacggccacggcg
tttgacaaggtgctatccgacgtccaagtggtttctgagtacatctcaattgaaagcaag
tcgggcaggatcaacttttcaggcaggggcgactctggcgaggccgacatctcgcttgaa
gcaggtaacgagggtctggaagagctggcagtcaaggaggagagcaaggccacctacagc
ctcgactacctgtcaaaaataaccaaggctgtaatatcgatgggcggctcggtggctgca
gagtattcgagcaagatgccgctcaggctagagttcaagatagccaacgttggcaggata
cacttctatctggcaccccgggttcaggattag
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integrated database retrieval system