KEGG   Candidatus Nitrososphaera gargensis: Ngar_c25260
Entry
Ngar_c25260       CDS       T02305                                 
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
nga  Candidatus Nitrososphaera gargensis
Pathway
nga03030  DNA replication
nga03410  Base excision repair
nga03420  Nucleotide excision repair
nga03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Ngar_c25260 (pcn)
   03410 Base excision repair
    Ngar_c25260 (pcn)
   03420 Nucleotide excision repair
    Ngar_c25260 (pcn)
   03430 Mismatch repair
    Ngar_c25260 (pcn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nga03032]
    Ngar_c25260 (pcn)
   03400 DNA repair and recombination proteins [BR:nga03400]
    Ngar_c25260 (pcn)
DNA replication proteins [BR:nga03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Ngar_c25260 (pcn)
DNA repair and recombination proteins [BR:nga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Ngar_c25260 (pcn)
   MMR (mismatch excision repair)
    Other MMR factors
     Ngar_c25260 (pcn)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Ngar_c25260 (pcn)
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9
Other DBs
NCBI-ProteinID: AFU59449
UniProt: K0INI8
LinkDB
Position
complement(1969081..1969833)
AA seq 250 aa
MVFVARSKSPEEWKAVASAISTLVDEATFEAAAEGISFRGMDPSHIALIDIHWPNHAFEK
YECDSLVKFGIRVDEFSKLIKRADKKDAIEISLGDDSMLHVKMSNGYKREYKTRLIESSA
SSTPLPKLNFNSKAVLTATAFDKVLSDVQVVSEYISIESKSGRINFSGRGDSGEADISLE
AGNEGLEELAVKEESKATYSLDYLSKITKAVISMGGSVAAEYSSKMPLRLEFKIANVGRI
HFYLAPRVQD
NT seq 753 nt   +upstreamnt  +downstreamnt
ttggtatttgtagctaggagcaagtcgcctgaagaatggaaggccgtggcatccgcgatc
tcaacccttgttgacgaggcaacgtttgaagcggccgcagaaggcatttcttttagaggc
atggacccgtcccatattgcgcttatagacatacactggcctaaccacgcgtttgaaaag
tacgaatgcgacagcttggtcaaattcggcataagggtagacgagttttcaaagctgata
aaaagggcggacaagaaggacgcgattgaaatcagcttgggcgatgacagcatgctgcat
gtaaagatgtcaaacggctacaagcgtgaatacaagacgcgcctgatagaaagctcggcc
agctctaccccgctgccaaagctcaactttaattcaaaagcagtgctcacggccacggcg
tttgacaaggtgctatccgacgtccaagtggtttctgagtacatctcaattgaaagcaag
tcgggcaggatcaacttttcaggcaggggcgactctggcgaggccgacatctcgcttgaa
gcaggtaacgagggtctggaagagctggcagtcaaggaggagagcaaggccacctacagc
ctcgactacctgtcaaaaataaccaaggctgtaatatcgatgggcggctcggtggctgca
gagtattcgagcaagatgccgctcaggctagagttcaagatagccaacgttggcaggata
cacttctatctggcaccccgggttcaggattag

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