KEGG   Candidatus Nitrososphaera gargensis: Ngar_c26690
Entry
Ngar_c26690       CDS       T02305                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nga  Candidatus Nitrososphaera gargensis
Brite
KEGG Orthology (KO) [BR:nga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nga03400]
    Ngar_c26690
Enzymes [BR:nga01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Ngar_c26690
    5.6.2.6  RNA 3'-5' helicase
     Ngar_c26690
DNA repair and recombination proteins [BR:nga03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Ngar_c26690
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII Cas3-like_C_2 DEXQc_Suv3
Other DBs
NCBI-ProteinID: AFU59590
UniProt: K0II36
LinkDB
Position
complement(2073634..2076447)
AA seq 937 aa
MKDQARNKNENSSAPEQLQTLKSDHAEEQLTIEKFRKEGFTSLTTIQRKALPVIARKVNC
LLVAPTGSGKTEAAVMPVFTMLAHQREVPAKTIRAIYITPLRALNNDVLRRVVRYAQSEG
LRVEIRHGDTTVLARKKIVKDPPDVLITTPESLAVVLTSEKMLAALKGLQWVIVDEVHEL
VANERGAHLSLSLERLQAASSSQHVARIGLSATVGNLKQTAQFVSGTGRRHAVLVDTTSR
GYDIDVRFVKGSLNNVAHFVIEYVKKEKVEGSILLFTNTRDEAEYLGTILKNQGDIKVDV
HHGSLSKEMREETEHTLRSGEAGIVVCTSSLELGLDIGSVDLVIHYGSPRQVSKLMQRIG
RSRHRQRSFAKGLVVTNNADDEIEALAIIRRMKKGSIEEQKMHEGALDVMAHHLVGLAMQ
TRDPVKVDYAYDLMTRAYPFRNVSLFDVESCLDILASHNVIKYDRDNRTYVRRIKAYKYY
FENLSMIPHVLKFEVIDSISKRRIGTLDQQFVGDYGEKGNVFVLKGSQWRVLSVDEGRLV
VNVEPLRGAAINIPYWVGEMIPVDYKTAEEVGEIRNQAANDAIKLSTPIMDETKKALKVI
PDSKNIVVESYGARNMLVIHSVFGSKVNNTLASLLSTILSSQLGYIVESRSDAYRIMLTS
SARIVQGKLEAVLSDVYDLEPVIIAALTGTHNINWKVWMVAKRFGMISREAVYDKKVARM
IYDRYSKTPVSAESIRELVHDKYDIARTQKVLDDIKQKKIKIHWLEVTEFSDLAKTIIEH
SGKMAGAMPLSVEKGVIELIKERLEKTKHRLVCIRCGKWERVMETKYVPEEISCPYCRSR
LITATFWSDDEMSRVIRTRLAGGKLTAEQNHKFERAWKVASLVNNFGKKAIIVLSGHGVG
ADTAARILRNYIDEEQVYKSIYEAERQYVITRGFWAD
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgaaagatcaagccagaaacaaaaacgagaacagcagcgccccggaacagctgcagaca
ctgaaaagtgaccacgcagaagaacagcttaccatagaaaaatttcgaaaagaaggcttt
acatctttaaccacgatccagcgcaaggctctgccagtcattgccagaaaagtgaactgc
ctgcttgtcgcgcccaccggctccggcaagaccgaggctgcagtcatgcccgttttcacg
atgcttgcccaccagagggaggtcccggccaagaccataagggcgatttacatcactccg
ctgcgcgccctcaacaacgacgttctccgacgtgtcgtgcgctatgcacagtccgaaggc
ttgcgggtcgaaatccggcacggcgacaccacggttctggcaaggaagaaaatagtcaaa
gacccgccggatgtcttaataaccacgccagagtcgcttgcggtggtcctgacaagcgaa
aagatgctggcggccctgaaaggcttgcaatgggtcattgtcgacgaagtgcacgagctg
gtggcaaacgagcggggcgcccacctttcattgagtcttgagcgtctgcaggccgcgtca
tcgtcacagcacgtcgcaaggatcgggctttctgccacggttggcaacctaaagcagacc
gcgcagtttgtttcgggcacgggcaggcgccacgcggtgttagtggacacgacaagccgc
ggctacgacatcgatgtcaggttcgtcaagggctcgctcaacaacgtcgcgcattttgtg
atcgaatacgtaaagaaggagaaggttgaaggctcgatcctacttttcacaaacacccgc
gacgaggccgagtacctaggcaccatcctgaagaaccaaggcgacatcaaggtggatgtc
caccacgggtcgctctcaaaggagatgcgggaagagacagagcatactttgagatcagga
gaagcaggcatagtggtatgcacgagctcgctcgagcttggccttgatatcggctcggta
gatctggttatccactacgggtcgccccggcaggtatcaaaattgatgcagaggatcggc
cggagcaggcaccggcaaaggagctttgccaagggtctggtggttaccaacaacgctgac
gacgagatagaagcgcttgcgataatccggcgtatgaaaaaaggctccatcgaggagcaa
aagatgcatgaaggcgcgctcgatgtcatggcccaccacttggttggactggcaatgcag
actcgtgatccggtaaaagtggactatgcgtacgaccttatgacccgcgcctaccccttt
agaaacgtcagcttgtttgatgtcgaaagctgccttgacattctggcaagccacaacgtc
ataaaatacgaccgggacaaccgcacctacgtccgcaggataaaggcgtacaagtattac
tttgagaacctctccatgataccccatgtcctgaaattcgaggtcattgactcgataagc
aagcgcaggataggcacgcttgaccagcagttcgtgggcgactatggtgaaaagggcaac
gtctttgtgctcaagggatcgcagtggcgcgttctgtcggtggacgaaggtcgattggta
gttaatgtcgaacctctgcgtggcgctgcaatcaacatcccctactgggtcggcgaaatg
atccctgtcgactacaagactgccgaagaggtgggcgaaatacgcaaccaggctgcaaat
gacgcgataaagctgtcgactccaataatggacgagacaaaaaaggcgctaaaagtaatc
ccggattcaaagaacattgttgttgaaagttacggtgcgcgcaacatgctggtcatacat
tccgtttttggatcaaaggtgaacaacacgctcgcatcattgttatcaaccatcctgtcg
tcgcagctgggctacattgtcgagtcgaggtctgacgcctacaggataatgctcacctca
agcgcaaggatcgtgcagggcaagcttgaagccgtgctgagcgacgtctacgacctagag
ccagtgatcattgcagccctgacaggcactcacaacatcaactggaaggtgtggatggtc
gcaaagcgctttggcatgataagccgcgaagcagtctatgacaagaaggtggcgcgcatg
atctacgacaggtattcaaagacgccagtgagcgctgagtcgatacgcgagctggtgcat
gacaagtacgacatagcacggacgcaaaaggtgcttgatgacatcaagcagaaaaagatc
aagatccactggctggaagtgaccgagttttcagaccttgccaagacgataatagaacac
tctggcaagatggccggcgcgatgccgctgagtgtggaaaaaggggtgatcgagctcata
aaggagcggctggaaaagacaaagcaccggctggtgtgcatccgctgcggcaagtgggag
cgcgtgatggagaccaagtatgtgcctgaagagatatcgtgcccctactgccggtcgcgc
ctcatcaccgcgactttctggtcggacgacgagatgtcaagggtgatcaggacaaggctt
gcaggcggcaagctgactgccgagcagaaccacaagttcgagcgggcgtggaaagtggcg
tcgcttgtcaacaactttggcaagaaggcgataatagtgctgtcaggtcacggggttggt
gccgacaccgcagcaaggatactgcgcaactacatcgacgaagagcaggtgtacaagagc
atctacgaagcagagaggcagtacgtgatcacccgcggcttttgggctgattaa

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