Candidatus Nitrososphaera gargensis: Ngar_c26890
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Entry
Ngar_c26890 CDS
T02305
Symbol
dppC
Name
(GenBank) peptide/opine/nickel ABC uptake transporter, permease protein
KO
K02034
peptide/nickel transport system permease protein
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ngar_c26890 (dppC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nga02000
]
Ngar_c26890 (dppC)
Transporters [BR:
nga02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Ngar_c26890 (dppC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
AFU59610
UniProt:
K0II52
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All DBs
Position
complement(2091321..2092709)
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AA seq
462 aa
AA seq
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MTAAKVVSRSELLREFRRSKSGLAGAGILLVLILMTTYAAVAVPLESFRQWNNPNFWIDT
PKSAAPAWTNLFGPKVPEHIFMTAKDAAVSSSVQGGVRTVTHSYTVNFNYDSYPSDFMML
YSARYGSTQPALQIDVLRPDGKEFRIYFASLPSSQQGSNEFSARVFSTDRLIADNLRNYL
DDFAYRQDVSRPQVMIFSDSQQDSVLKGTYVIRETFYLFDSNDSVTNSGVILGGEVYGLM
GTDELRHDLAIGILWGAPVALFIGLTVSIAGMIIGLIYGVIAGYKGNRTDEGLMRINDVF
YSLPPLPLLIILSITVGKSIFLITGFLVIFGWVGMAKISRSIALQLKNLQYVEAAKLMGQ
SDRKIIFKHIIPQLLPLTFASIAISVPGAILGEAMLSFLGLGDPSIPTWGQILHDANSAG
AASRGLWWWIIPPGLMIAITGLAFVLIGNALDAIVNPRSRRM
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagccaaagttgtttcacgctctgagctactaagggagttcaggcgctccaag
agtggccttgccggcgctgggatactgcttgtcctcatactgatgacaacctatgcggcg
gtcgcggtgccgcttgaatcattcaggcagtggaacaaccccaacttttggatcgacacc
cccaagtctgctgcgccggcttggacaaacctgttcgggccaaaggtgccggagcacatc
ttcatgacagcaaaagatgcagcggtatcaagctcggttcaaggaggcgtgcgcaccgtg
acgcattcatacacggtgaactttaactatgattcgtacccgagcgactttatgatgctg
tattctgcgaggtacggcagcacacagccggctctccagatagacgtgctgcggcctgac
ggcaaagaattcaggatctactttgcttcgcttccttcgtcacagcaaggtagcaatgag
ttctcggcaagggtattttccacggacaggctgatcgccgacaacctgcgcaactatctg
gacgattttgcatacaggcaggatgtttcaaggccgcaggtaatgatattttcagactca
caacaagacagtgtgttgaagggcacgtacgtaatccgtgaaaccttttacctgtttgat
tcaaacgactcggtgaccaactccggggtcatattgggcggcgaggtctatggactcatg
ggcacggacgagctgcgccatgacttggcgatcggaatcctgtggggagcgccggtggcg
cttttcatagggctcaccgtttcaatagccggcatgatcattggtctgatatatggtgtt
atcgcaggctacaaaggaaaccgcactgatgagggcctgatgaggataaacgacgtattt
tactcgctgccgccacttccgctgctcatcatattgtcgatcacggtcggcaagagcata
ttcctgatcaccggttttcttgtaattttcggctgggtcggcatggcgaaaataagcaga
agtatcgcgctccagctaaagaacctgcagtacgtcgaagcggcaaagctcatgggccag
tctgacaggaagatcatattcaagcacataatcccgcagctgctgccactgacttttgcc
agcattgccatttctgtgccgggggcaatcttgggcgaagcaatgctcagctttctggga
cttggagacccgtccattccgacgtggggtcagatcctgcatgacgcaaactctgcaggc
gcagcttcccgcggcctctggtggtggataattccgcccggcctcatgatagccataaca
gggcttgcgtttgtgcttattgggaacgcgcttgatgccatcgttaacccaagatcaaga
agaatgtga
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