Candidatus Nitrososphaera gargensis: Ngar_c28530
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Entry
Ngar_c28530 CDS
T02305
Symbol
tfb9
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ngar_c28530 (tfb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nga03021
]
Ngar_c28530 (tfb9)
Transcription machinery [BR:
nga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Ngar_c28530 (tfb9)
Prokaryotic type
Archaeal type
TFB
Ngar_c28530 (tfb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
C1_2
Cyclin_N
DZR
Zn_ribbon_3
Auto_anti-p27
Cyclin_C
Rota_NSP3
Motif
Other DBs
NCBI-ProteinID:
AFU59773
UniProt:
K0IKH9
LinkDB
All DBs
Position
complement(2222467..2223450)
Genome browser
AA seq
327 aa
AA seq
DB search
MLSKHSSRPDDEQCSACGSPPITDNFTGELVCSSCGVVLKERVETLSPEWRSFSSADNRA
RGGFPSSLLIYDTGLSTYIGTTFVQDQKQQGGDQENNNNNKNEGGSVYVHRASCPIPVNR
LRKLNAMSVSSAPVSRNLKKATWEINRICSSLGLAWQVAERSAYFYRKALQKNLIKGRSI
SGFVAASVYLACKERMIPRTIDEVCRATGVDRPFATRCYKILVSEMHIEPPPITDPFRNI
AKISTRAGIEERVSRRAMEILSSVTSHTTIMGKNPLVLAAAALYLATVEHKLNMTKTMIA
DAAEVSTISLRKRLADITCALEDLSRR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaaaacattctagtaggccggacgacgagcagtgctcagcatgcggcagcccg
ccaatcacagataactttaccggcgagcttgtctgcagctcgtgcggcgtggtcctcaag
gagagagtcgagacgctgtcgccagagtggaggtcgttctcttcggccgacaacagggca
aggggaggctttccatcgtcgcttctgatatatgacacgggactttccacctacataggc
actacgttcgtgcaggatcagaagcaacaaggaggcgatcaggaaaacaataataacaac
aaaaatgaaggcggctccgtctatgtgcaccgcgcctcctgtccgattccggtgaacaga
ctgcgcaaactgaacgccatgtctgtttcaagcgcgcctgtttcaaggaacctcaagaag
gcgacctgggagataaacaggatatgcagcagtctcgggcttgcgtggcaggtggccgag
aggtccgcgtatttttaccgaaaagcactacaaaagaacctgataaaggggagatcgatc
tcggggtttgtcgccgcttctgtgtaccttgcatgcaaggagaggatgataccccggacc
atagacgaagtttgccgggccacgggcgtcgacaggccttttgcaacccgctgttacaag
attctggtaagcgagatgcacatcgagccccctcctatcacagatccgttcaggaacatt
gccaagatttctacaagggccggcatcgaggagcgagtgtcaaggagggcgatggagatc
ctatcatccgtcacaagccacaccacgataatgggcaagaacccgcttgtcctggccgcg
gccgcgctgtaccttgcaacggtagagcacaagctcaacatgaccaagacaatgatagcc
gacgcggcagaggtcagcacgatttcgctccgcaagaggcttgcggacattacctgtgcg
cttgaagacctcagtcggagataa
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integrated database retrieval system
