Candidatus Nitrososphaera gargensis: Ngar_c29270
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Entry
Ngar_c29270 CDS
T02305
Name
(GenBank) putative transcriptional regulator, TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
nga
Candidatus Nitrososphaera gargensis
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nga03000
]
Ngar_c29270
Transcription factors [BR:
nga03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ngar_c29270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
MarR_2
HTH_IclR
Regulator_TrmB
HTH_24
PLDc_2
Sulfolobus_pRN
Motif
Other DBs
NCBI-ProteinID:
AFU59845
UniProt:
K0IIR9
LinkDB
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Position
complement(2285107..2285928)
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AA seq
273 aa
AA seq
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MAAKMDEFKVTNPGLDIENSLTAELQKLDLTLNEARILLFLMTHGNSTASDVSRHTGIQR
TETYNYISTLLAKGVVFSTFDRPQKYYALPINEVIDCLVQTKQNALQSIAEKKKDYQEMV
EAILSNTVIPESDKKESYQIVMGENSINAKIKRMLAEAKEEVTVLVTDRNLVNMYHAEIT
DQLIQLTSKGVRVKLRTPCKNANDYISTEDGEKAPISLKTTAKVVPVNFVLVDNKDIILL
LESNSFKKSELCGFYTNNLSMISVFTFIFDNLI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaaatggacgaattcaaagtaacgaaccctggtttggacatagaaaatagc
ctgacggctgagctgcaaaagctggaccttacactgaatgaagcgaggatacttttattc
cttatgacccatggaaactcgacagcaagcgatgtttcccgccatacagggatccagcgc
actgaaacttataactatatttcaacgctccttgcaaagggagtcgtcttttcgaccttt
gacaggccgcagaaatactatgccttgccgatcaacgaagtcatagactgccttgtgcag
acaaagcagaacgccctgcagtcgatagcggagaaaaagaaggactaccaggaaatggtc
gaggccatactgagcaacacagttatccccgaatcggacaagaaagaaagctaccagata
gtgatgggcgaaaactcgatcaacgccaagataaagaggatgcttgccgaagccaaggaa
gaggtcactgttcttgtgacagacaggaaccttgtcaatatgtaccatgccgaaataacg
gatcagctgatccagctgaccagcaagggagtccgggtcaagctcaggacgccatgcaag
aatgcaaacgactacatcagcacagaagatggcgagaaggctccgatttcgctaaagacg
accgccaaggttgtcccggtgaactttgtcctcgtcgacaacaaggacatcatactgctg
cttgaaagcaactcgttcaaaaagtcagagctgtgcggcttttacaccaacaacctctct
atgatctcggtctttacgttcatctttgataaccttatataa
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