KEGG   Candidatus Nitrososphaera gargensis: Ngar_c32790
Entry
Ngar_c32790       CDS       T02305                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
nga  Candidatus Nitrososphaera gargensis
Pathway
nga00260  Glycine, serine and threonine metabolism
nga00460  Cyanoamino acid metabolism
nga00630  Glyoxylate and dicarboxylate metabolism
nga00670  One carbon pool by folate
nga00680  Methane metabolism
nga01100  Metabolic pathways
nga01110  Biosynthesis of secondary metabolites
nga01120  Microbial metabolism in diverse environments
nga01200  Carbon metabolism
nga01230  Biosynthesis of amino acids
nga01240  Biosynthesis of cofactors
nga04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:nga00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Ngar_c32790 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    Ngar_c32790 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Ngar_c32790 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    Ngar_c32790 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Ngar_c32790 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    Ngar_c32790 (glyA)
Enzymes [BR:nga01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     Ngar_c32790 (glyA)
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_5 Aminotran_1_2 SelA
Other DBs
NCBI-ProteinID: AFU60194
UniProt: K0INY7
LinkDB
Position
2576765..2578084
AA seq 439 aa
MSAKKAYDDVLKLMREHHDWFDRSIPLIASENIPSPAVREAIMSDFGNRYAEGWPGERVY
AGCIYIDQVELICNDLARKVFRAEFADCRATSGVVANLAIYAAFTNPGDWMMAASIPAGG
HISHGKKEHAGTAGLVHGLNIEHYPFSKEEMTIDVDATKKKIDEMVREGKPPTMGMFGGS
LFLFPHPVKELAEYMHQHGMYVNYDGAHVAGLIAGGEFQDPLREGVDSMTMSSHKTLWGP
QGGIIVSLEKHAEAIKKAVFPGNTSSHHLHHVAGKAIALAESLEFGKQYAKQVIKNAKAL
AEALAGYGFRVLGEKRGYTASHQIAVDVMKFGDGGTIEKQLEKAGIILNRQLLPGDIKAG
RHYMHPSGVRIGVPETTRLGMKESEMKEIANFIKRVVIDKQDPAIVAKDVAEFRKQFQKV
QYAFDNAVKAYEYISLTGR
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgagtgccaagaaggcttatgacgacgtcctgaagctgatgcgcgagcatcacgactgg
tttgacaggtccataccgctcattgcaagcgaaaacatcccaagcccggcggtgagggag
gccatcatgtctgactttggcaaccgctacgcggaggggtggcccggcgagcgcgtttat
gcaggctgcatttacattgatcaggttgaattgatatgcaatgaccttgcgcgtaaagtg
ttccgcgcagagtttgcggactgtcgtgcgacctctggtgtcgtagcaaaccttgcaata
tatgcggcatttacaaatccaggggactggatgatggcggcttcaataccggcaggtgga
cacatttctcacggcaagaaggaacatgccggtaccgccggccttgtgcatgggttgaac
atagagcactatccattttcaaaagaagagatgacaattgatgttgatgcgaccaagaaa
aagatagacgagatggtacgcgaaggcaagcctcccaccatgggcatgttcggcggcagt
ctgtttctgttcccacacccggtgaaagagcttgcagaatacatgcaccagcatggcatg
tacgtcaactatgacggggctcatgttgctggattgatagctggtggcgagttccaggac
ccattgagagagggtgttgactcgatgaccatgagctcgcacaagactctgtggggcccg
cagggtggaatcattgtgtcgcttgaaaagcatgccgaagccatcaaaaaggcagtattc
cctggcaacactagcagccaccacctgcaccatgtcgcaggcaaggcaatcgcacttgct
gaatcacttgaatttggcaagcagtatgccaagcaggtcatcaagaacgcaaaagccctt
gcagaggcgctggctggatatggctttagagttttaggagaaaagcgcggctatactgca
tcgcaccagattgcggttgatgtcatgaagtttggcgatggtggcacaattgaaaaacag
ctagagaaggcgggcataattctgaacaggcagctgctgccgggtgatatcaaggctggc
aggcactatatgcacccaagtggagtgaggataggcgtgccagagacgacgcgccttggc
atgaaagagagtgagatgaaagagattgccaactttatcaagcgcgtagttatagacaag
caggaccctgcaattgtggccaaagatgttgcagagtttagaaaacagttccagaaggtg
cagtatgcgtttgataacgcagtcaaggcgtacgagtacataagcctgaccggaagatag

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