Candidatus Nitrososphaera gargensis: Ngar_c32790
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Entry
Ngar_c32790 CDS
T02305
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga00260
Glycine, serine and threonine metabolism
nga00460
Cyanoamino acid metabolism
nga00630
Glyoxylate and dicarboxylate metabolism
nga00670
One carbon pool by folate
nga00680
Methane metabolism
nga01100
Metabolic pathways
nga01110
Biosynthesis of secondary metabolites
nga01120
Microbial metabolism in diverse environments
nga01200
Carbon metabolism
nga01230
Biosynthesis of amino acids
nga01240
Biosynthesis of cofactors
nga04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ngar_c32790 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Ngar_c32790 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ngar_c32790 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Ngar_c32790 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Ngar_c32790 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Ngar_c32790 (glyA)
Enzymes [BR:
nga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Ngar_c32790 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
SelA
Motif
Other DBs
NCBI-ProteinID:
AFU60194
UniProt:
K0INY7
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All DBs
Position
2576765..2578084
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AA seq
439 aa
AA seq
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MSAKKAYDDVLKLMREHHDWFDRSIPLIASENIPSPAVREAIMSDFGNRYAEGWPGERVY
AGCIYIDQVELICNDLARKVFRAEFADCRATSGVVANLAIYAAFTNPGDWMMAASIPAGG
HISHGKKEHAGTAGLVHGLNIEHYPFSKEEMTIDVDATKKKIDEMVREGKPPTMGMFGGS
LFLFPHPVKELAEYMHQHGMYVNYDGAHVAGLIAGGEFQDPLREGVDSMTMSSHKTLWGP
QGGIIVSLEKHAEAIKKAVFPGNTSSHHLHHVAGKAIALAESLEFGKQYAKQVIKNAKAL
AEALAGYGFRVLGEKRGYTASHQIAVDVMKFGDGGTIEKQLEKAGIILNRQLLPGDIKAG
RHYMHPSGVRIGVPETTRLGMKESEMKEIANFIKRVVIDKQDPAIVAKDVAEFRKQFQKV
QYAFDNAVKAYEYISLTGR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaagaaggcttatgacgacgtcctgaagctgatgcgcgagcatcacgactgg
tttgacaggtccataccgctcattgcaagcgaaaacatcccaagcccggcggtgagggag
gccatcatgtctgactttggcaaccgctacgcggaggggtggcccggcgagcgcgtttat
gcaggctgcatttacattgatcaggttgaattgatatgcaatgaccttgcgcgtaaagtg
ttccgcgcagagtttgcggactgtcgtgcgacctctggtgtcgtagcaaaccttgcaata
tatgcggcatttacaaatccaggggactggatgatggcggcttcaataccggcaggtgga
cacatttctcacggcaagaaggaacatgccggtaccgccggccttgtgcatgggttgaac
atagagcactatccattttcaaaagaagagatgacaattgatgttgatgcgaccaagaaa
aagatagacgagatggtacgcgaaggcaagcctcccaccatgggcatgttcggcggcagt
ctgtttctgttcccacacccggtgaaagagcttgcagaatacatgcaccagcatggcatg
tacgtcaactatgacggggctcatgttgctggattgatagctggtggcgagttccaggac
ccattgagagagggtgttgactcgatgaccatgagctcgcacaagactctgtggggcccg
cagggtggaatcattgtgtcgcttgaaaagcatgccgaagccatcaaaaaggcagtattc
cctggcaacactagcagccaccacctgcaccatgtcgcaggcaaggcaatcgcacttgct
gaatcacttgaatttggcaagcagtatgccaagcaggtcatcaagaacgcaaaagccctt
gcagaggcgctggctggatatggctttagagttttaggagaaaagcgcggctatactgca
tcgcaccagattgcggttgatgtcatgaagtttggcgatggtggcacaattgaaaaacag
ctagagaaggcgggcataattctgaacaggcagctgctgccgggtgatatcaaggctggc
aggcactatatgcacccaagtggagtgaggataggcgtgccagagacgacgcgccttggc
atgaaagagagtgagatgaaagagattgccaactttatcaagcgcgtagttatagacaag
caggaccctgcaattgtggccaaagatgttgcagagtttagaaaacagttccagaaggtg
cagtatgcgtttgataacgcagtcaaggcgtacgagtacataagcctgaccggaagatag
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