Nannochloropsis gaditana: NGA_0049402
Help
Entry
NGA_0049402 CDS
T02917
Symbol
PPP1C
Name
(RefSeq) protein phosphatase 1, catalytic subunit
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NGA_0049402 (PPP1C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngd01009
]
NGA_0049402 (PPP1C)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngd03021
]
NGA_0049402 (PPP1C)
03019 Messenger RNA biogenesis [BR:
ngd03019
]
NGA_0049402 (PPP1C)
03041 Spliceosome [BR:
ngd03041
]
NGA_0049402 (PPP1C)
Enzymes [BR:
ngd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
NGA_0049402 (PPP1C)
Protein phosphatases and associated proteins [BR:
ngd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
NGA_0049402 (PPP1C)
Transcription machinery [BR:
ngd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NGA_0049402 (PPP1C)
Messenger RNA biogenesis [BR:
ngd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NGA_0049402 (PPP1C)
Spliceosome [BR:
ngd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
NGA_0049402 (PPP1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
17360949
NCBI-ProteinID:
XP_005854177
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
GALPGQRHPRILGAASESFEAERARTPRVRAGAATACCPAFHPRYPTLMSTATTNAAGGS
VEGMSEVDGIIEKLLTVRGARPGKPVQLLESEIRMLCNKSKDVFMEQSMLLELEAPIKIC
GDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILR
GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAVIDEKIFCMHGGLSPELTS
LEEIKDIMRPTDVPDTGLLCDLLWADPDKDIMGWGDNDRGVSYTFGEDVAASFLKQHDLD
LICRAHQVVEDGYEFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK
QRYAYAGLTGAGIGLGAGGGGGRPATPPKAPGLMGNGKK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
ggtgccttgccaggccagaggcatcctcgtattctcggtgccgcctccgagtctttcgag
gctgagcgcgcgagaaccccacgcgttcgggctggtgctgctacagcctgctgccccgct
ttccatccaagatatccgactctaatgtcaacagctacaacaaatgcagcaggaggaagt
gtagaagggatgtctgaagtggatggtatcattgaaaaactccttaccgtccgtggggcc
aggcccgggaaacccgtgcagctcctggagtcggagatccgcatgttgtgtaataaatcg
aaggacgtgtttatggagcaatcgatgcttttggagctagaggcacccattaagatttgc
ggcgatattcacgggcagtactatgatttgttgcggctgttcgagtatggcggatttcct
cccaatgccaactacttgttcctaggtgactatgtggaccgtgggaagcagtctttggaa
acaatctgtcttctcctcgcctacaaaatcaagtatccggagaacttcttcattctccgc
ggaaaccacgagtgcgcctctatcaaccggatctacggcttctacgacgaatgcaaacgc
cgatacaacatcaagctatggaagacattcacggactgcttcaactgcctccccatcgcc
gccgtcatcgatgagaagatcttttgcatgcacgggggcctctccccggagcttacctcg
ttggaggagattaaggatataatgcggcccacggacgtgccagacacggggctgctctgc
gacttgctgtgggcggaccccgacaaagacatcatgggttggggagacaatgaccgtggc
gtctcgtacacgttcggggaggacgtggcggccagcttcttgaagcagcacgaccttgac
ctcatctgccgagcgcatcaggtggtggaggacggctacgagttcttcgcgaggaggcag
ctcgtcaccatcttctcggcgcccaactattgtggagaattcgacaatgccggcgctatg
atgagcgtggatgagacgctgatgtgctccttccagatcctcaagccggcagagaagaaa
cagcggtatgcgtacgcaggactgacaggggccggcattggtttaggggcaggcggggga
ggagggaggccagcaacaccgcctaaggcgccagggctgatgggcaatgggaagaagtaa
DBGET
integrated database retrieval system
