Nannochloropsis gaditana: NGA_0075710
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Entry
NGA_0075710 CDS
T02917
Name
(RefSeq) hypothetical protein
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngd04121
]
NGA_0075710
Enzymes [BR:
ngd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
NGA_0075710
Ubiquitin system [BR:
ngd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
NGA_0075710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-Nse
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
17362038
NCBI-ProteinID:
XP_005855273
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MAMQALLHTWGTQTATERQRITDSEGVGSGATQRLKEFVRLQGKGCFYAANTTGYYRGAW
TKQVEPPVALEANPGRRLRLMQAGGSDGLPGVAGRFGGSAEETRRRPATKTGAQVPGGMR
LHHTEGRVDVQLFMNPVAGLTDLSLVHGYFKLLDGPFSSERDVFAVLKGVYLRRDGRLLL
RTVSQKQAGTLGFAYTLPASSAKTFRAQGSDSDKPAGRATRTLGEPSQRLGGGEGVEGNP
GDASDQASPSHMAANADTGLERRIAGVWGDVASYPDVEMRLDAVLREVAASAGTDLEDRA
AGREAEEADVFFGMQLQADKKLDMDGADESEGAEVVGLTVLKGGALLAGMEEKAAPDGGL
LETVLIPDRTKERYFRHQTSNGRRCVFTLDARSSPRLNASQVMGQTGAQGDASSSSSTAA
AESQARLELADGFEGTLTSPECDVALSVSSQAIRLDWTQAYRKAVNYSIIVTLVCVLQIA
LLFRQLYFSRTQAAASRVSLLCIGQQAILDALLCIAHLLLCAVLQPLFAAFASIAFFKLV
IFSIFEIRYMFIIHQSRDSQSAAATSFNGLRRQLAALHARFYAVLFLLLFLVYFLAQYLE
VLVFVLYSFWVPQIVMNASKGLRRPLNRTYVLGMSLARLAIPLYVYGCPENFIHLIFSGY
RPDYRLCFALVVWVGAQVAVLLSQDYLGPQYMIPARFLPPKYNYYRPVPQGRGGRAQGPQ
PTVRAGGLVHTQSSGSSGGCEEIELMDLEEGPGHGGEADGEEGGALECAICFNDVDVTRL
GSYMVAPCNHVFDRECLERWMDIKLECPVCRCSLPHR
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcaggctctcctgcatacgtgggggacgcagacagcaacggagaggcagagg
attaccgacagcgaaggggtaggcagtggggcgacgcagcgattgaaagagttcgtccgg
cttcaaggaaaaggatgtttctacgctgcaaacaccaccggctactaccgcggggcctgg
acaaagcaggtggaaccgcctgtggctttagaggccaatcccgggcgccgcctccgcctc
atgcaggccggggggagtgacgggctgccgggggtggcgggcaggttcggcggctctgcg
gaggagactcgccgcaggccagccaccaagacgggggctcaggtgccagggggcatgcgg
ctgcaccatacagaggggcgcgtggacgtgcagcttttcatgaatcccgtggcaggcctg
accgacctgagtctggtgcatggctacttcaagctcctggacgggcccttctcctccgag
cgcgacgtgttcgcagtcctcaagggcgtgtacctgcgccgtgatggccgtctcctgctc
cgaaccgtctcgcagaagcaggcaggcaccctgggcttcgcctacaccctcccggcctcc
tcggccaagaccttccgggcccaaggcagcgatagcgacaaacctgcagggcgcgcgacc
cggaccctaggagagccgagccagcgtctagggggcggagagggggtagagggcaatccc
ggcgacgcgagtgatcaggcctctccctcgcacatggcggcaaacgccgataccggcctt
gagagacggatagcaggtgtctggggagatgtagcaagctacccggatgtggagatgcgc
ctggatgccgtcttgagggaggttgcagcgagcgcaggtactgacctggaggatcgggcg
gcagggcgagaggcagaggaagcggacgtgtttttcggaatgcagttacaggccgacaag
aagctggatatggatggagctgatgagagtgaaggggcggaagtggtggggctgacggtg
ctgaaaggtggggcgctgttggcggggatggaggagaaggcggctccggacggcggcttg
ctggagacagtcctgatcccagacaggaccaaagagagatacttccggcaccagacgagc
aacgggcggcgttgcgtgttcaccctggacgcgcgctcctccccgcgcctgaacgccagc
caggtcatgggccagacgggggcccagggcgacgcctcctcctcctcctccactgccgcg
gcggagagccaggcgcggcttgagttggcggatggcttcgaagggacgctgaccagtccc
gagtgcgacgtggctctgagtgtgtcctcacaggcgatccgcctcgactggactcaggcc
tatcgcaaggccgtcaactactccatcatcgtcacccttgtctgcgtcctgcaaatcgct
ctcctcttccgccagctctatttctcgcgcacgcaagcagcggcctctcgggtctccctc
ttgtgtatcggccagcaagccatcctagacgccctcctctgcatcgcccacctccttctg
tgcgctgtgcttcagcccctcttcgccgccttcgcctccatcgccttcttcaagcttgtc
atcttctccatcttcgagatccgctacatgttcatcatccaccagtcacgcgattctcag
tccgccgctgccacctccttcaacggccttcgccggcagctagccgccctccacgcccgt
ttctacgcggtccttttcctcctcctcttcctcgtttacttcttggcgcagtacttggag
gtcctcgtcttcgtcctttactccttctgggttccgcagatcgtcatgaacgccagcaaa
ggcctccggcgtcctctcaatcggacctacgtgcttggcatgagtctggcgcgcctcgcc
atccccctctacgtgtacggctgtccggagaactttattcacctcattttttcgggctac
aggcccgattaccggctctgcttcgccctggtcgtctgggtgggggcgcaagtcgctgtc
ctcctctcgcaagattaccttggcccgcagtatatgatcccagcgcgcttcctaccgccc
aagtacaactactatcgcccagtgccccagggaaggggggggagagcgcaaggtcctcaa
cccacagtgcgagcaggagggttggtgcacacgcaaagcagtgggagcagtggtggctgc
gaggagattgagttgatggacctggaagagggaccgggacacgggggagaagcggatggg
gaggagggcggggccctggagtgcgccatttgcttcaacgacgtggacgtgacgcgcttg
gggagctacatggtagcgccgtgcaatcacgtcttcgacagggagtgtctggagcgctgg
atggacatcaagttggagtgtcctgtctgccggtgctcccttcctcatcggtga
DBGET
integrated database retrieval system
