Nannochloropsis gaditana: NGA_0098800
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Entry
NGA_0098800 CDS
T02917
Name
(RefSeq) rna-binding protein 8a
KO
K12876
RNA-binding protein 8A
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03013
Nucleocytoplasmic transport
ngd03015
mRNA surveillance pathway
ngd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NGA_0098800
09122 Translation
03013 Nucleocytoplasmic transport
NGA_0098800
03015 mRNA surveillance pathway
NGA_0098800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngd03019
]
NGA_0098800
03041 Spliceosome [BR:
ngd03041
]
NGA_0098800
Messenger RNA biogenesis [BR:
ngd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
NGA_0098800
Spliceosome [BR:
ngd03041
]
Complex C
Other components
EJC/TREX
NGA_0098800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
17361959
NCBI-ProteinID:
XP_005855186
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MSSLRHDDEEVDFDEEGERGGGDITSSLDPEGHPPPSSSSSSPPRALKKRKSEGQTSLHV
KGRGHRSQEERGEGGRPPSFEVLGGEGGGEGGAAKSIEGWVIMVTGLHEEAQEDEVVDRF
GEFGEGTPWLNSP
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctccggcacgacgacgaggaagtggatttcgacgaggaaggcgagaggggc
gggggggacatcacctcctccctcgacccggagggccatccccctccttcctcctcctcc
tcctccccgccccgggccctgaaaaaacgcaaaagcgagggccagacgtcgttgcacgtc
aaagggcgcgggcaccgaagccaagaggagcgcggggagggcgggaggccgccctcgttc
gaggtcttgggaggggagggaggaggggaagggggtgccgccaagtcgatcgaggggtgg
gtgataatggtcacgggcttgcacgaggaggcgcaggaggacgaagtggtggaccgtttc
ggggagttcggggagggtacgccctggttgaattcaccttaa
DBGET
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