Nannochloropsis gaditana: NGA_0127000
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Entry
NGA_0127000 CDS
T02917
Symbol
RPB11
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03020
RNA polymerase
ngd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NGA_0127000 (RPB11)
09124 Replication and repair
03420 Nucleotide excision repair
NGA_0127000 (RPB11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngd03021
]
NGA_0127000 (RPB11)
03400 DNA repair and recombination proteins [BR:
ngd03400
]
NGA_0127000 (RPB11)
Transcription machinery [BR:
ngd03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
NGA_0127000 (RPB11)
DNA repair and recombination proteins [BR:
ngd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
NGA_0127000 (RPB11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Thermo-DBP
Motif
Other DBs
NCBI-GeneID:
17362066
NCBI-ProteinID:
XP_005855294
LinkDB
All DBs
Position
Unknown
AA seq
126 aa
AA seq
DB search
MNEPKRADSYRLSEGEKKCEWKDSANEKMANSGTLVINKEDHTMGNLIRMQLLRDKQVKF
AGYIHPHPLIHKIELRVQTLDRALSTPMQALENALSDLNQEFTGLKARFQQEVRRVQAEQ
ADREYR
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagcccaaacgagctgactcctaccgcttgtccgagggcgaaaagaagtgcgaa
tggaaagacagcgcgaatgaaaaaatggcgaactcaggcacccttgtcattaacaaggag
gaccacacgatgggaaacctgatccggatgcagcttctgagggacaaacaggtgaagttc
gcggggtacattcacccgcatcccttgatccataagatcgagctgcgagtacagaccctg
gacagggcgctctctacgcccatgcaggccctggagaacgccctctccgatctcaaccaa
gaatttacagggctcaaggctcgcttccaacaggaagtccgacgggtgcaggcggagcag
gcggatagggagtacagatag
DBGET
integrated database retrieval system
