Nannochloropsis gaditana: NGA_0171300
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Entry
NGA_0171300 CDS
T02917
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03430
Mismatch repair
ngd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NGA_0171300 (MLH1)
03460 Fanconi anemia pathway
NGA_0171300 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngd03400
]
NGA_0171300 (MLH1)
DNA repair and recombination proteins [BR:
ngd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
NGA_0171300 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
17361452
NCBI-ProteinID:
XP_005854679
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MLPPACQVTDFPLLCERFTTSKLRHFEDLRSIASFGFRGEALASITHVARVSITSKTRDS
PCAYKARFQDGKLVPGVGVGGNAKPQPCAGTNGTTITAEDLFYNMQTRRQALKNPNDLYR
AVLDVVTRYAVHFGKDGISFTCRKQGQARPDLYTPQRGASVLGAIKVAFGQVLGRELLEL
NVSSEERREGGREGASGAPTSPSKDEERAVESGRERMEEGRGNAGVRSAQGEEGLSFKAH
GYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHV
DVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGLAPPTDLTQVIG
APGPPTLEQGDDRSTMIEDKDIEGRDGEGAVQAKRKERQALLPYKMIRTDASMRNLRSFL
YTPEADDYHSQQQSQPSPQDENPDSQDAAQLSSPLAAEVDSRNHDKQEGDSGTEKKEEVP
DVRDDGAVPLVVASSSTAT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcttccccctgcctgtcaggtgaccgacttccccctcctctgcgagaggttcaccaca
agcaagctccggcatttcgaagacctgcgttcgattgcctccttcggatttcgcggcgag
gccctggccagcatcacccacgtggcccgtgtctccatcaccagcaaaacccgcgacagt
ccctgcgcctacaaagcccgcttccaggacggaaaattagttcccggggtgggagtcggg
ggcaacgccaagccgcagccctgtgcgggcacgaatgggacgacgatcacggcggaggac
ctcttttacaatatgcagacccgccgacaggctctgaagaacccgaacgacctctatcgt
gccgtcctggacgtggtcacgcgctacgccgttcactttgggaaagacggcatctctttc
acttgcagaaagcaaggccaagcccggccagacctttatacgccacagagaggcgcctcc
gtgctcggtgccatcaaggtggccttcggtcaggtgttggggcgtgagttgctggaactc
aatgtctcgtcggaggaaaggagggaaggcgggagagagggggcaagcggtgcgcccacg
tcgcccagcaaagatgaagagagggcggtggaaagcgggagagagcgcatggaagaaggg
agggggaacgcaggagtgcgatcggctcaaggggaggagggcttatccttcaaggctcac
ggctacgtctccaacgcgaatttcaacatgaagaaaggcgtctttatgctcttcattaac
aaccggatggtggagtccacagccatcaagcgaataatggagagcgtctacgccccgatc
ctacccacccacacccaccccttcctctacctcgccctcgacctccctccagctcatgtc
gacgtgaacgtccacccgacgaaacgagaggttcatttcttgcacgaggacgagctgctt
tcgaagctcgcggcgggcctcgaggcattgctgagaggcgcgaatacttcgagaaccttc
tacgggaaaagccttgcccatgggctcgccccgccgacggacttgactcaggtgattgga
gcaccaggtcctcccaccctagaacaaggagatgaccgctcgacaatgattgaggacaag
gacatcgagggaagagacggagaaggagcagtacaagccaagaggaaggagaggcaggcg
cttttgccgtataagatgatacgcacggacgctagcatgcgtaacctccgctctttcctc
tacactcccgaggccgacgactaccattcgcagcagcaatctcagccgtctccccaggat
gaaaatccagacagccaggacgctgcacagctttcatctcccctggctgcagaggtagac
tccaggaatcacgacaagcaggagggagacagcggcacggaaaagaaggaggaggtgccc
gacgttcgggacgatggagccgtccctttggtggtcgcgtcgtcgtccactgcgaca
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