KEGG   Nannochloropsis gaditana: NGA_0175800
Entry
NGA_0175800       CDS       T02917                                 
Name
(RefSeq) nuclear distribution protein
  KO
K11804  DDB1- and CUL4-associated factor 8
Organism
ngd  Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:ngd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ngd04121]
    NGA_0175800
Ubiquitin system [BR:ngd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     NGA_0175800
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_Aladin
Other DBs
NCBI-GeneID: 17361357
NCBI-ProteinID: XP_005854589
LinkDB
Position
Unknown
AA seq 585 aa
MVGKLKVDGRLTGHRGCVNTVAFSEHGDFCVTGSDDTYLMLWNVAAHECRMKHLSGHQGN
IFCARFLPHTNNTEVVSVAADGQVRWNSLARPSSLLHCPWIVLTLPLSGISKQLARHNGR
AHRLAVTETTSFLTCGEDGRVLGFDTRDAHKRHLLTVTTPEDDVIPLYALSCSPVDGHSF
VVGGTSVYMHHYDARHVREPVGRYAPFHLRDDKDGASKARKLVSDHITGTAFNWNGREVL
ATYNDECVYLFRVDRDAARGGAEGGGEQVPWESSQDGLVSDHGEERAEHRRPSHMGPREA
EEDGQEDASPRAGDSPALHPCSAAYSNPQKRMRQQTSTRQTMRGDVLEEKLRGYTQVFRG
HRNDHTVKQVNFFGARSEYVVSGCDTGHIFMWETQSGELAQLLYGDRRGAVNCLETHPNL
PVLATSGLEHDVKIWRPTRGLSVRKGALKAHGGEMAEKLAERNEKERKKAARISNFTRFM
MGRALSSVSGERAGSGSEEEDSEDGLEGEEESGDGQSSRQAWMMDYARFLVGGDESSEDG
DESGLEGVLEDSTDVSSSESSHENDQSESGMRSGVDAEDGDTDDG
NT seq 1758 nt   +upstreamnt  +downstreamnt
atggtggggaagctcaaagtcgacggccgtctcacgggccaccgggggtgcgtgaatacc
gttgctttctccgagcacggagacttctgtgtgaccgggtcggacgacacttatctgatg
ctatggaatgtagcagcgcatgaatgtcggatgaagcacctcagtggacaccaaggcaac
atattttgcgcgcgtttccttcctcacactaacaatactgaggtcgtgtctgtggctgcc
gacggccaagttcgatggaactcccttgcccgaccctcctctctgctccattgtccttgg
atcgtcttgacactacccttgtcaggcatcagcaagcaactggctcggcacaacggtcga
gcccatcggttggcagtgacggagacgacctccttcttgacctgtggggaggacggccgc
gtcctgggcttcgacacgcgcgacgcacataagcgtcacttgctgaccgtgaccacccct
gaggacgacgtgatcccactctacgcgttgagctgcagcccggtggacggtcattccttc
gtggtgggaggcacgtcggtgtacatgcatcactacgacgctcggcatgtgcgtgagccg
gtgggccggtacgcacccttccatttgcgggacgacaaggatggagcaagcaaggcgagg
aagctcgtcagcgaccacatcacgggcacggccttcaattggaacgggagagaggtcctg
gcgacgtacaacgacgaatgcgtctacttgtttcgggtagaccgcgatgctgcccgaggc
ggggcggagggggggggagaacaggtgccctgggaaagcagccaagatgggttggtctct
gatcatggggaggagagggccgagcaccggcgtcccagccatatgggaccacgcgaggcg
gaggaagacgggcaggaggatgcctccccgcgcgcgggagactctcctgccctgcatcca
tgttcagcggcgtattcgaacccacaaaaacggatgcggcaacagacatcgacgcggcaa
acgatgagaggagatgtactggaggagaagctgcgaggatatacccaggtcttccgaggg
caccgcaatgaccacacagtgaagcaggtgaacttctttggcgcccgaagcgagtacgtt
gtctccgggtgcgacacggggcacatattcatgtgggaaactcagagcggggagctggcg
cagttgctgtacggggaccgacggggggcggtaaactgcctcgagactcaccccaacctc
cccgtactcgcgacaagcggtttagagcacgacgtgaaaatatggcgacctaccagaggg
ttgagtgtgcgaaaaggagcgttgaaggctcatggaggggaaatggcagagaaactagcc
gagcggaatgaaaaggagcgcaagaaagctgcgcgcatctcgaattttacaaggttcatg
atggggagggcgctgtcgagtgtatcgggtgagcgcgcggggagcgggtcggaagaagaa
gattcagaggatggattggaaggggaagaagaaagtggtgacgggcaatcttctcgacag
gcttggatgatggattacgcaaggtttttggtcggcggggacgagagcagcgaggacgga
gatgagagcgggctagaaggggtgcttgaggacagtaccgatgtgtcgtcctcggaaagt
tcccatgaaaacgatcaaagcgagagtggcatgaggagcggtgtcgatgctgaggatgga
gatacggatgatggctga

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