Nannochloropsis gaditana: NGA_0207910
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Entry
NGA_0207910 CDS
T02917
Name
(RefSeq) c2h2 zinc-finger protein
KO
K27103
serrate RNA effector molecule
Organism
ngd
Nannochloropsis gaditana
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngd03019
]
NGA_0207910
Messenger RNA biogenesis [BR:
ngd03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
NGA_0207910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
17361026
NCBI-ProteinID:
XP_005854254
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MRGPAPRSRYGRGKKGKALAYKPSGYGVAREPLQARMMRNVFFLTEKVQGMASKGKKMTR
ELKEYFSGDFESMLLKATRPDDARPPPEFIGAILDATATFHRDEDLTAGSNPYRVTLRKL
WAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVFAKMSREGCKKSRSRYFXXXXPR
PTALPSLCTISSSRHTLAASARPGPPALHPLHRGVAAPLPPTSAAGMPPIQSFQKFMLEQ
TDEPSAEESLQRYAEYKFKYIEDYSKMVFEEKKSEEWFLERYLPCARHEKEVVAKREWAR
AEASRFSRQLLQQPDLFIVSASLEPNMELEYHALVKRYAKSGAARSHLPLGAAAENAEES
KVAEGVNGEGDAGHGTTESAGRSEEAAGAGIGLDAKGLEGHADATLYVRPFSSTVPRAPL
EKLLRERGGPFVRFLLSDPAKSTYCNMRSAWLVYATKEQADSARQTLHNTEAEHPLEEQV
RAGQQPPPPDYFRPFTLQLSAHNGKRTVPVPLDLSDPKHLEKDATQPQLYKRVEPFKPSE
KDEKSSGNVDESGVISSEWTKSMDGKVCKLVAAVQEGSRLKGLDEEAQTQRDAEEKSVFL
PLAPMLQAKQKWLAENMSNEDEGRWRCGAEGCTKLFKSSEFLQKHLLLKHGGGVEEALRM
VRTTIVRSAFEADQEKPLPPVQVDKGSNVLKAVPVGEILSEVAAVLGKDMSSWRRLIEES
SRRRARASGAGGGAGAYRGRGHYGPRSIPGVGVGGASETGPLGLHGAVTAQEAPPPRVSK
NYKDIDVPKSEGSQTTEDTGREEVLERRHCLVWRGLIQDDHGEINPLPSVPKTEPSVRAE
PKTSRETQEADLRAQSPGAR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcccagccccgaggtcgaggtatggcagaggcaagaagggcaaggcgctggcg
tacaagccttccggctacggggtggcgcgggagccgctgcaggcgcggatgatgcggaac
gtgttcttcttgacggagaaggtgcagggcatggcgagcaaggggaagaagatgaccaga
gagctgaaagagtactttagcggggactttgaaagcatgctgctcaaggcaacacggccg
gacgacgcccgcccgcctcccgagttcatcggcgccatcctggacgcgaccgccaccttc
catcgggacgaggacctgactgcgggcagcaacccctaccgagtcacgctgcgaaagctg
tgggcgaagatggcggagagggattggcgcaccgtggccaaggccctgtacctcttccac
gtcctcctccgcgaatgcgagcccgacgacgtgcgcatttacaagaaggtgttcgccaag
atgagccgggaggggtgcaagaagtcccggtcccggtacttcnnnnnnnnnnccccccgc
cctacggcgctcccgtccctatgcaccatcagcagcagcaggcacacccttgccgcctca
gcacgtcccgggcccccagccctccatccgctgcatcgaggcgtggccgcacctctgccc
cccacctccgccgccggcatgccgcccatccagtcctttcagaagttcatgctggagcag
acggacgagccctcggcagaagagtcgttgcagcgatatgccgagtacaagttcaagtac
atcgaggactattcgaagatggttttcgaagagaaaaaatcagaggaatggtttttggaa
cggtatcttccctgcgcacgacatgagaaggaagttgtagccaagcgagagtgggcgaga
gcggaagcctcacgcttctcgcgacagctgctccagcagcccgatttattcatagtctca
gcttcattagagcctaatatggagcttgaatatcatgccctcgtaaaacggtacgccaaa
agtggcgccgcaagatctcatttaccattgggtgcggctgcggagaatgctgaggaaagc
aaggtagcagagggcgtcaatggagaaggtgatgcagggcacgggaccaccgagagcgcg
ggaagatcagaagaggcagcaggggcgggcataggtctggacgcgaagggcttggagggt
catgcggacgcgacgctctacgtcaggcccttttcctcgacggtcccccgtgctccccta
gagaagctgctgcgggagcgcggagggccctttgtccgattcctcctctcagaccccgcc
aaaagtacttactgcaacatgcgatcagcgtggctagtgtatgccacaaaggagcaggca
gattctgcacgtcagacacttcataataccgaggcagagcatcctctggaggagcaggtg
cgcgcaggccagcaaccccctccgccggactactttcgacccttcactctgcagctgtcc
gcgcataacgggaagcgaacggtaccagtgcctctcgacctctccgatcccaagcatctc
gaaaaggatgcgacacagcctcaactttacaagcgcgtggagccattcaagccctcagaa
aaggatgaaaaatcatcgggaaacgttgacgagtctggtgtcatatcaagcgagtggacc
aagagcatggatggcaaggtctgcaagttggtggctgcggttcaagaaggctcacgattg
aaggggcttgacgaagaggcgcagactcaaagagacgcggaagagaagtcggttttcctc
cccctcgcacccatgctgcaggccaaacaaaagtggctggcggaaaacatgtcgaatgag
gacgaagggcggtggcgatgcggggcagaagggtgcacgaaactcttcaagagcagtgag
tttctgcaaaaacacctgctgctaaagcacggtggtggagtggaggaagcgctgcgcatg
gtccgcacaacgattgtacgctcggcgttcgaagcagaccaagagaaaccgttaccgcct
gtgcaggttgataaaggcagcaatgtcctgaaggccgttcccgtcggcgaaatcttaagc
gaggtagccgccgttttgggcaaggatatgtccagttggagacgactcattgaggaaagc
tctcgtcgccgtgcgcgtgcaagtggtgcaggaggtggtgcgggcgcgtatcgtgggcga
gggcattatggtcctcggtcgatacctggcgtaggtgtaggcggggcgtcggaaacaggc
cctctaggactacacggggctgttaccgctcaggaagccccccctcctcgcgtgagcaag
aactacaaggacatcgacgtcccaaaatcagaggggagtcaaaccaccgaagacacaggt
cgtgaagaagtgctcgagaggaggcattgcctagtctggcggggcctaatacaagacgac
catggagaaatcaatcccctgccgtcggtgccaaagactgaaccttcggtgcgtgccgaa
cccaagacctcgcgggagacccaggaagccgaccttcgcgctcaatcacccggcgcgcgc
taa
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