Nannochloropsis gaditana: NGA_0211101
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Entry
NGA_0211101 CDS
T02917
Name
(RefSeq) carbohydratebinding protein
KO
K14308
nuclear pore complex protein Nup54
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NGA_0211101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngd03019
]
NGA_0211101
Messenger RNA biogenesis [BR:
ngd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
NGA_0211101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
TFIIA
DUF1612
Nup88
Motif
Other DBs
NCBI-GeneID:
17361021
NCBI-ProteinID:
XP_005854248
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MSFAGFGTASQPQQNSQTPKPFSSFGAPAPASLFGTPAAASATGAFGSTNAFGSQPQQQQ
QQQQQQQQQQQQQQQPSLFGGFGLNASGTTTGTASRQPFGASAYGSTGSTTAGLFGTPAA
SSSPFGMTAGTSAQKPPTPGFFGGTSGFGGGEGGFGGMGGVGRHPGAGQGPNTVGAGAMG
SMGGMPFAAPTPQQQEQQRQLQQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFA
SSLQPQQQPSRVVDYKFAFRVTDTSTGVPREVELRDRSAIEAKLKGQQEEMRRVQEHVER
LGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDR
LESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGL
DFLTTALGRDCQGVELLKEKLDEVRAGRGGVV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgctggttttgggacggcaagtcagccccaacaaaattcccaaacgcccaag
cctttcagctcttttggagcccctgctcctgcgtccctattcggcacgcctgccgctgct
tccgccaccggggcttttggatcaacaaacgcattcggaagtcaaccacagcagcagcag
cagcaacagcagcagcagcaacaacaacaacaacagcagcagcagccttctttatttggt
ggttttggccttaatgcatcggggacgacaacaggaaccgcctcgcgccaaccctttgga
gcctctgcatatggcagtactggcagtactacagctggcctctttggaacgcccgccgcg
tcatccagtccctttggaatgacggcagggacatcggcacaaaagcctccaacccctggc
ttttttggtggtaccagtgggtttggcggcggggaagggggatttggcgggatggggggc
gtcggacgacatcccggagctggtcagggtcccaacactgtgggcgctggagcgatggga
agcatgggcgggatgccattcgctgcccccacaccgcaacagcaggagcagcagcggcaa
ttgcagcagcgacagttctgggagcaggagctaaacatgcttcgggaggcctacctgcct
cacgaccagccagcgtcgcaagcactgcagcaacagcaaccgcagcttggaatgttcgcg
tcttcccttcagccgcagcagcagccttctcgggttgttgactacaaatttgccttccgc
gtgacggacacgagcacgggggtgcccagagaagtcgagttgagagatcgaagcgcaatc
gaggccaagctgaagggccagcaggaagagatgcgtcgagtgcaagagcacgtggaaagg
ctgggaggaggggtcaaagccttgtatagccaggcacgggctgcaaaagagaggctggcg
cgttgtcgggatgcgcacatggagctcaccaacaggttcttggcggtactgcagcgcctg
caagtcctccgccaggtgaaccgtcccatttctcaggaagaaaaacaaacgaaagaccgc
ttggagagcatgctaggacgactggaaggtgcgattcggactttgaacgaagttggcggc
gtggtggaggaggatgaactcgatcgaagggaggagccccggcaagagttgacatgcgac
ctggcccgcgaggacgttcacctgttgcaacaggcgttggaaaaacagcaaggagggcta
gatttcttgacgacagccttgggcagggattgtcaaggggtggagcttctcaaggagaag
ctagacgaggtccgggcagggagggggggggtcgtgtag
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integrated database retrieval system
